G236623


Basic Information

Item Value
gene id G236623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23761979 ~ 23762351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270422
atctcaaaatagggctccTTAATGTTATATCcttcacttcaaaggcagttatagtcaatgaactgatcataatcttgatgtgattggcctgactgaaacatggcttaagcctgatgaatctactgtgttaaatgaggcctcacctcctggttacactagttaCCATATCCCGCAAAGGcgaaggtgttgctaacatttacgatagcaaatttcaatttacaaaaaaaaaagatgttttcatcttttgagcttctagtcatgaaatctatgcagcctactcaatcactttttatagctactgtttacaggcctcctgggctatatacagcgttcctcactgagttccttGAATTCCTAtcgtagtcatagcaga

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270422 True 373 lncRNA 0.39 1 23761979 23762351

Neighbor

gene id symbol gene type direction distance location
LOC110514561 NA coding upstream 43218 23713371 ~ 23718761 (+)
LOC110514526 LOC106605333 coding upstream 53163 23702665 ~ 23708816 (+)
LOC110514513 LOC106580947 coding upstream 65533 23677362 ~ 23696446 (+)
LOC110514472 LOC106581037 coding upstream 387539 23369004 ~ 23374440 (+)
LOC110514448 LOC106581016 coding upstream 419960 23306232 ~ 23342019 (+)
LOC110514613 hormad1 coding downstream 18049 23780400 ~ 23795199 (+)
LOC110514668 LOC106580869 coding downstream 58071 23820422 ~ 23832249 (+)
LOC110514708 LOC106580852 coding downstream 104916 23867267 ~ 23886989 (+)
LOC110514755 LOC106580807 coding downstream 129534 23891885 ~ 23907345 (+)
LOC110514733 LOC106580799 coding downstream 146537 23908750 ~ 23932207 (+)
G236622 NA non-coding upstream 2595 23758573 ~ 23759384 (+)
G236616 NA non-coding upstream 12473 23749270 ~ 23749506 (+)
G236615 NA non-coding upstream 13316 23748429 ~ 23748663 (+)
G236625 NA non-coding downstream 3201 23765552 ~ 23765841 (+)
G236549 LOC106580904 non-coding downstream 3504 23765855 ~ 23770162 (+)
G236647 LOC106580864 non-coding downstream 70052 23832403 ~ 23850161 (+)
G236671 NA non-coding downstream 108530 23870881 ~ 23871565 (+)
G236672 NA non-coding downstream 112642 23874993 ~ 23875259 (+)
G236372 LOC106581434 other upstream 411164 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 412601 23346880 ~ 23349378 (+)
G236301 NA other upstream 562904 23198852 ~ 23199075 (+)
G236271 LOC106581124 other upstream 581680 23144516 ~ 23191853 (+)
G235569 NA other upstream 1081251 22673525 ~ 22685509 (+)
G236753 NA other downstream 292968 24055319 ~ 24055667 (+)
G238034 NA other downstream 987054 24749405 ~ 24750383 (+)
G238047 NA other downstream 1003315 24765666 ~ 24766363 (+)

Expression


Co-expression Network