G236684


Basic Information

Item Value
gene id G236684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23932309 ~ 23933163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270502
aacactctaaccactaggctacctgccaccccatggactccctctgtgtgaaataataggggttgatGGGATTTCtgaagtattgaatttcaagcacagattgaACTAcgagaagggcagtgattggtagatgataaaaataacaaatcagacattgaatatatctttaagcatggtcaagttaataagtATGCTGTGGAGGATGTGTCAAAcaacccagacacatcaaagaaacagtcgtccttctgaactgagctgcaggataGGAAGGAAACTGTTTAGGGATGTCAACATGCGGCCATTGCGTCCAACACAACAAATCACTGAGTAACTGTCTCCATATTTGCAAGcaaggtggtggctgcatcatggtatgcatgggtatgcttgacatcggcaaagaCTGGTGAATTGTTCAGGATGAaaagaaacaggatgcagctaagcacaggcaaaatcgtaGTGGACAACCTGCTTTaatctgctttacaccagacactgggagaggaattcaccttgaagcaggacaataacctacaacacaagactaaatctacactggagttgtttaccaagaagacagtgaatgttcctgagtggccaggACAATAATAGCCAGTTGACTTAAATATGCTTGAAAATCTAGACTTGAAAATGACTttctagccatgatccccaacaccttgccagagcatgaagaattttgaaaagaataatggggaaATATTGCACAATACAGGTATACAAAGCTCTTACGAGACTTACCCAAGAAAACTCAcctctgtaatcgctgccaaaggtgtttctaccaTGTATTGActtgggggtgaatacttatttaatcaAGGTATATGA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU270502 True 855 lncRNA 0.41 1 23932309 23933163

Neighbor

gene id symbol gene type direction distance location
LOC110514733 LOC106580799 coding upstream 102 23908750 ~ 23932207 (+)
LOC110514755 LOC106580807 coding upstream 24964 23891885 ~ 23907345 (+)
LOC110514708 LOC106580852 coding upstream 45320 23867267 ~ 23886989 (+)
LOC110514668 LOC106580869 coding upstream 100060 23820422 ~ 23832249 (+)
LOC110514613 hormad1 coding upstream 137110 23780400 ~ 23795199 (+)
LOC110514794 LOC106580834 coding downstream 5787 23938950 ~ 23941425 (+)
LOC110514781 isg20l2 coding downstream 13645 23946808 ~ 23950487 (+)
LOC110503942 LOC106580754 coding downstream 23939 23957102 ~ 23975804 (+)
rhgb rhgb coding downstream 86588 24019751 ~ 24029429 (+)
LOC110503950 LOC106605316 coding downstream 172353 24105516 ~ 24184256 (+)
G236658 NA non-coding upstream 42512 23883280 ~ 23889797 (+)
G236672 NA non-coding upstream 57050 23874993 ~ 23875259 (+)
G236671 NA non-coding upstream 60744 23870881 ~ 23871565 (+)
G236647 LOC106580864 non-coding upstream 82148 23832403 ~ 23850161 (+)
G236686 NA non-coding downstream 125 23933288 ~ 23933833 (+)
G236687 NA non-coding downstream 773 23933936 ~ 23934443 (+)
G236707 NA non-coding downstream 12383 23945546 ~ 23945785 (+)
G236743 NA non-coding downstream 98472 24031635 ~ 24031848 (+)
G236752 NA non-coding downstream 119729 24052892 ~ 24053123 (+)
G236372 LOC106581434 other upstream 581494 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 582931 23346880 ~ 23349378 (+)
G236301 NA other upstream 733234 23198852 ~ 23199075 (+)
G236753 NA other downstream 122156 24055319 ~ 24055667 (+)
G238034 NA other downstream 816242 24749405 ~ 24750383 (+)
G238047 NA other downstream 832503 24765666 ~ 24766363 (+)
G238050 NA other downstream 842116 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 1262124 25195287 ~ 25199234 (+)

Expression


Co-expression Network