G236838


Basic Information

Item Value
gene id G236838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24215381 ~ 24215807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270683
ttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgattcttcacaaaaaaatacagttttatatcttcatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtattttgatttccccatgatgtcaagtaaagaggcagtgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaatgatgtcaatgagcttatcagaagcttctaaagccatgacttcattttctggaattttccaagctgtttaaaggcacagtcaacagagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctttaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270683 True 427 lncRNA 0.47 1 24215381 24215807

Neighbor

gene id symbol gene type direction distance location
LOC110505138 LOC106580604 coding upstream 7752 24204483 ~ 24207629 (+)
LOC110503950 LOC106605316 coding upstream 31125 24105516 ~ 24184256 (+)
rhgb rhgb coding upstream 185952 24019751 ~ 24029429 (+)
LOC110503942 LOC106580754 coding upstream 239577 23957102 ~ 23975804 (+)
LOC110514781 isg20l2 coding upstream 264894 23946808 ~ 23950487 (+)
LOC110514864 LOC106580670 coding downstream 11105 24226912 ~ 24261294 (+)
LOC110514930 LOC106605309 coding downstream 83900 24299707 ~ 24313412 (+)
LOC118947812 m4a8a coding downstream 126755 24342562 ~ 24352353 (+)
LOC110515127 LOC106581815 coding downstream 495676 24711483 ~ 24718629 (+)
LOC110515164 LOC106581855 coding downstream 601768 24817575 ~ 24819244 (+)
G236782 NA non-coding upstream 30725 24184352 ~ 24184656 (+)
G236798 NA non-coding upstream 113026 24102140 ~ 24102355 (+)
G236762 NA non-coding upstream 114523 24065964 ~ 24100858 (+)
G236752 NA non-coding upstream 162258 24052892 ~ 24053123 (+)
G236743 NA non-coding upstream 183533 24031635 ~ 24031848 (+)
G236842 NA non-coding downstream 6466 24222273 ~ 24222648 (+)
G236844 NA non-coding downstream 8172 24223979 ~ 24224206 (+)
G236871 NA non-coding downstream 76190 24291997 ~ 24292241 (+)
G236753 NA other upstream 159714 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 286294 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 420186 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 864566 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 866003 23346880 ~ 23349378 (+)
G238034 NA other downstream 533598 24749405 ~ 24750383 (+)
G238047 NA other downstream 549859 24765666 ~ 24766363 (+)
G238050 NA other downstream 559472 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 979480 25195287 ~ 25199234 (+)
G239026 NA other downstream 1324962 25540769 ~ 25541613 (+)

Expression


Co-expression Network