G236842



Basic Information


Item Value
gene id G236842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24222273 ~ 24222648 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU270687
acatcatagaataatagtgaagaaatcaaaactatgaaattacacatatggaatcatgtagtaaccaaaagagtgttaaacaaatcaaaatatattttatatttgagattcttcaaagtagccaccctttgccttgacaactttgcacacccttggcattctctcaaccagcttcacctggaatgctttttcaacagtcttgaaggagttaccacatacgctgagcacttgttggctgctttttcttccaactcatcccaaaccatctcaattgggttgaggttgggtgattgtggaggccaggtcatctgatgcagcactctatcactcttgTTATTtgtggtcaaatagcccttacacagcctggaggtgtgtt

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU270687 True 376 lncRNA 0.48 1 24222273 24222648

Neighbor


gene id symbol gene type direction distance location
LOC110505138 LOC106580604 coding upstream 14644 24204483 ~ 24207629 (+)
LOC110503950 LOC106605316 coding upstream 38017 24105516 ~ 24184256 (+)
rhgb rhgb coding upstream 192844 24019751 ~ 24029429 (+)
LOC110503942 LOC106580754 coding upstream 246469 23957102 ~ 23975804 (+)
LOC110514781 isg20l2 coding upstream 271786 23946808 ~ 23950487 (+)
LOC110514864 LOC106580670 coding downstream 4264 24226912 ~ 24261294 (+)
LOC110514930 LOC106605309 coding downstream 77059 24299707 ~ 24313412 (+)
LOC118947812 m4a8a coding downstream 119914 24342562 ~ 24352353 (+)
LOC110515127 LOC106581815 coding downstream 488835 24711483 ~ 24718629 (+)
LOC110515164 LOC106581855 coding downstream 594927 24817575 ~ 24819244 (+)
G236838 NA non-coding upstream 6466 24215381 ~ 24215807 (+)
G236782 NA non-coding upstream 37617 24184352 ~ 24184656 (+)
G236798 NA non-coding upstream 119918 24102140 ~ 24102355 (+)
G236762 NA non-coding upstream 121415 24065964 ~ 24100858 (+)
G236752 NA non-coding upstream 169150 24052892 ~ 24053123 (+)
G236844 NA non-coding downstream 1331 24223979 ~ 24224206 (+)
G236871 NA non-coding downstream 69349 24291997 ~ 24292241 (+)
G236884 NA non-coding downstream 121866 24344514 ~ 24344753 (+)
G236753 NA other upstream 166606 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 293186 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 427078 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 871458 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 872895 23346880 ~ 23349378 (+)
G238034 NA other downstream 526757 24749405 ~ 24750383 (+)
G238047 NA other downstream 543018 24765666 ~ 24766363 (+)
G238050 NA other downstream 552631 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 972639 25195287 ~ 25199234 (+)
G239026 NA other downstream 1318121 25540769 ~ 25541613 (+)

Expression



Co-expression Network