G236844


Basic Information

Item Value
gene id G236844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24223979 ~ 24224206 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270689
TAATTAACACAGATcctgtggtgtaaagtacttcagtaaaaatacttgaaagtactactttagACGTTTTtcggggtatctgtactttactttactatttttgacaacttttacttcactacattcctaaagaaaagagtgtactttttactccatacgttttccttgacacccaaaagtacttgttacattttgaatgcttagcaggacaggaacattgtctaattc

Function

NR:

description
hypothetical protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270689 True 228 lncRNA 0.49 1 24223979 24224206

Neighbor

gene id symbol gene type direction distance location
LOC110505138 LOC106580604 coding upstream 16350 24204483 ~ 24207629 (+)
LOC110503950 LOC106605316 coding upstream 39723 24105516 ~ 24184256 (+)
rhgb rhgb coding upstream 194550 24019751 ~ 24029429 (+)
LOC110503942 LOC106580754 coding upstream 248175 23957102 ~ 23975804 (+)
LOC110514781 isg20l2 coding upstream 273492 23946808 ~ 23950487 (+)
LOC110514864 LOC106580670 coding downstream 2706 24226912 ~ 24261294 (+)
LOC110514930 LOC106605309 coding downstream 75501 24299707 ~ 24313412 (+)
LOC118947812 m4a8a coding downstream 118356 24342562 ~ 24352353 (+)
LOC110515127 LOC106581815 coding downstream 487277 24711483 ~ 24718629 (+)
LOC110515164 LOC106581855 coding downstream 593369 24817575 ~ 24819244 (+)
G236842 NA non-coding upstream 1331 24222273 ~ 24222648 (+)
G236838 NA non-coding upstream 8172 24215381 ~ 24215807 (+)
G236782 NA non-coding upstream 39323 24184352 ~ 24184656 (+)
G236798 NA non-coding upstream 121624 24102140 ~ 24102355 (+)
G236762 NA non-coding upstream 123121 24065964 ~ 24100858 (+)
G236871 NA non-coding downstream 67791 24291997 ~ 24292241 (+)
G236884 NA non-coding downstream 120308 24344514 ~ 24344753 (+)
G236919 NA non-coding downstream 176414 24400620 ~ 24483407 (+)
G236753 NA other upstream 168312 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 294892 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 428784 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 873164 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 874601 23346880 ~ 23349378 (+)
G238034 NA other downstream 525199 24749405 ~ 24750383 (+)
G238047 NA other downstream 541460 24765666 ~ 24766363 (+)
G238050 NA other downstream 551073 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 971081 25195287 ~ 25199234 (+)
G239026 NA other downstream 1316563 25540769 ~ 25541613 (+)

Expression


Co-expression Network