Gene
RNA
| Item | Value |
|---|---|
| gene id | G237701 |
| gene name | LOC106605310 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 24255885 ~ 24256465 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| platelet endothelial aggregation receptor 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU271624 | True | 335 | lncRNA | 0.52 | 2 | 24255885 | 24256465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gpatch4 | gpatch4 | coding | downstream | 34158 | 24217505 ~ 24221727 (-) |
| LOC110514831 | nes | coding | downstream | 57072 | 24189209 ~ 24198813 (-) |
| LOC118947709 | NA | coding | downstream | 177032 | 24067930 ~ 24078853 (-) |
| LOC110514815 | LOC106580773 | coding | downstream | 275585 | 23975874 ~ 23980300 (-) |
| LOC110514697 | LOC106580864 | coding | downstream | 405961 | 23841341 ~ 23849924 (-) |
| LOC110514890 | LOC106580679 | coding | upstream | 2616 | 24259081 ~ 24286618 (-) |
| LOC110514944 | LOC106580659 | coding | upstream | 57090 | 24313555 ~ 24323816 (-) |
| LOC110514960 | raa2a | coding | upstream | 64279 | 24320744 ~ 24330914 (-) |
| mapip | LOC106580651 | coding | upstream | 75061 | 24331526 ~ 24336143 (-) |
| LOC110514914 | LOC106605242 | coding | upstream | 80259 | 24336724 ~ 24342873 (-) |
| G237663 | NA | non-coding | downstream | 55941 | 24199648 ~ 24199944 (-) |
| G237594 | NA | non-coding | downstream | 153784 | 24101852 ~ 24102101 (-) |
| G237593 | NA | non-coding | downstream | 154417 | 24101224 ~ 24101468 (-) |
| G237567 | NA | non-coding | downstream | 197273 | 24058344 ~ 24058612 (-) |
| G237563 | NA | non-coding | downstream | 210214 | 24045463 ~ 24045671 (-) |
| G237703 | NA | non-coding | upstream | 27734 | 24284199 ~ 24284429 (-) |
| G237705 | NA | non-coding | upstream | 29092 | 24285557 ~ 24285790 (-) |
| G237714 | LOC106605309 | non-coding | upstream | 43728 | 24300193 ~ 24300653 (-) |
| G237723 | NA | non-coding | upstream | 49217 | 24305682 ~ 24309011 (-) |
| G237732 | NA | non-coding | upstream | 92641 | 24349106 ~ 24349359 (-) |
| G237657 | LOC106605316 | other | downstream | 71921 | 24180556 ~ 24183964 (-) |
| LOC110514600 | ensa | other | downstream | 475750 | 23771511 ~ 23780158 (-) |
| G237047 | NA | other | downstream | 1066854 | 23157109 ~ 23189031 (-) |
| G235881 | NA | other | downstream | 1680896 | 22573833 ~ 22574989 (-) |
| LOC118946878 | NA | other | downstream | 2500384 | 21744425 ~ 21755710 (-) |
| G237832 | NA | other | upstream | 264754 | 24521219 ~ 24521544 (-) |
| LOC110515154 | LOC106605289 | other | upstream | 513097 | 24767049 ~ 24799511 (-) |
| LOC110515208 | LOC106581894 | other | upstream | 680051 | 24936516 ~ 25052970 (-) |
| LOC110515384 | LOC106582009 | other | upstream | 942623 | 25171287 ~ 25236536 (-) |
| LOC110515750 | LOC106582146 | other | upstream | 1566891 | 25822812 ~ 25825108 (-) |
