G237723


Basic Information

Item Value
gene id G237723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24305682 ~ 24309011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU271659
AACAAATTCAAAATGATATTTTCACCTTGTAAAAATAATCAAAATCCCACTTATATAGCAGGCATTTGACTGGACGTAAATtactgatatatatatacacagatgCGCAGAATCCTTTCTCATAAAGCACAATGCAAATTTCTCCCACAGCCTCTAAAACAGTGAGACTCTCTAAAAAGCCCTCATTAAACCAGTGCAAACTCAACCAAGTCATCAgtactgactgaatggatgagaGGTCTCCcataataccactactacaagGAATAACAATAATTATATTAGAAAAACATGAAAGGGAAACCTTACAGTATGTGCATGGCTTTCAAAATCTATGAAGAAATATTCACCATCAGCGGTCAGTTTGGTATTAATTATGTGTTTTCTCATAAGGTGCTTTACTCTATATTTTAATGTAAAGTCTTTATGAGCCTAATTTCCCAATTCCATTTAATCCCACCCAACCCGGTTGATTCACATTCTTTTCTGACAAATAGTTACGTTAAAGTTTTTTTTAAGGGGCAATACTATTGAAGGCCTACTGTATGTCACTAAACTTTCATGCCAAAGTGAAAGCAATATTAATATTTTAATACAAAATATtaaggcttaaaacaaaataaaaaagaaTAGAAAATACTATATTCATTTAACAGCGTTATACTGCCTTGAAATTGTCATTGAAAGTTCAGACCAAACCACTGTGCAGTTCTCCCCATTCATAAATATTAAATTAATTTCTATATATGTCATAGAATTTAGATACTCTGAAAGTACAATTTCTTCACAGTCCACAGACAACAGGAGTGGTCTGCTGACAATACAATGGGGGAAAAGTGGGCTCTGTTGCGGCCTAGACTAGGGACAACAGTCTATTGTAACTATTCGCCATATTTTGATGGACAGAAGTTGAGCAAAAGTGTTCTCCTGAAATAACGCAATAGAGCGATCTGATGCAGTGTTAGTGGGAGAGCAGCTGAATCACCTTGTTCACCTGCCACCACCAGCAAACATGAGGCAGCAGCCTTCTAACTACCCCTTCACTGAAGACACAGAAATGACCCCTCTCACAAAGACTAGATCTGCAGGTTCTCTTTTTTTGGGGagcagccatctctctctccacccccaaaAGCCCCCCTCTTATCCTCCAACGGCTCtaatccccctccctccctctgaaaTCCCCAGGCTGGGGCTAAGGCAGAGGCAAAGGGTGTGTAATTTGATTCAGCATGAGTGGTGGCTAAATGGGGCGTTTCCTCCGCTTTCCTGTCAATTACAATCGTCTGATTTCATTCTGAAGGCCCAGTGCTAGCCTGCCATTGGCTAAGCCTGTGTGATTGTGGTGAGTGGGCAGCTGCAGGATGTCCCATACAGACGGGAGATAAAGGGGGGGGGCTCTCTATGGAAACTTCGATCTGCGCTCGCTCTCTGTCACAAAGGCCTCCATCCAAATTGGGGTGGGGTGATGAACTCCAAGTGATCAGACTCCTCGTACTCTTAAATGATATATGTCTGCATGCTTTCAAACCCTTATCTTATTGAGAACACATGGAGACATCTAGTTCAGTGGGAAATGTCAAAGAATTGGATCTGTGTGGCAGAATTTACACTAGGTAATTACTGTATCTACTGACACTGTTGATATCCTTTCTTTCTCCAAAGTCCCCTCACTCTCATTTCAGAGCTGGCAGCCTGAAATATGCTGCTTTTTTCCTGAGTGTTGGGACAAAGGAGGCCCCTCTCCCCAGTAGGGATAGCTCAGAGCagcagagaaggaaagagggagggggatatGGAAGGAGGGGTCCCATTCGCCCAGCTGCACCCAGACTGGACCTTCTGTGCCTGTGACAGAGGGATGGGGCGGTCAGCACCAGGTTCCCCCGCACAGTCCGCACCTGGACCGGACAATTTGCCTAATTATCAATGAGTCTCTCCGGGCCGTGTCCAAGCACTCCGGGCCCACGCCACCACTGGGCATAGACAATACGCCCCACACAGGGAAGCAATGCATTGTGGGTCGGCTGCAGTCATTACTACCTTCAATAGCCAGCGATCGAACAgtaagcaggggggggggggggactcccaAAGAAAATAGAAAAAGAGGGGGCTAAAAAAGACCTCAAAGTTGAGGTCACATCCACAGTGCGCTATTAAACACCTGCTCCTGCACAGCTCTGATAATTATAGGCCTCTGAGCTAAAATACAAAGCTGCTGGACGGGGGTGGCGAGGGAGCTCTGTGGATGGTGGTACTGTATTCTAGGAGCTTTTCGCCCATTTAGGCACACTCTATTACCAATTCAGAGAACagctcagtgttttcctcagCTTCTGTCCACTCTAATGGCTGACGCTCTAACTGCGCAAACCTCAGAGAGATGCCTGTCAAAAGTGGCTCTCGTTTTTGTCCTACATCGTTCAGATAACAGCTAAATTACCACATAAGACAATAAAGTGGGTATTAGTTGGCTTTGAAACTAGTCCGTCGGGGAGACGATTCTCCCAAATTAGCCAACTGGAAGAATTCCAAGGCTTTTGGCCTCACAAATGAAATCAGTGCTTAACACCGGCGAAATAAACATGCTTTTCAAGTGCCACGAGGAACAGGCATCGCTGAAACTTTTCACCAAACTGCAGTGATATTCAAGGTGTAACAGAAGTGAACATTTCAGCAATACAATGTGTAGCATTCATTCACCTCTTTGTGAAAAACGAAATCTATAAAACATATGTGCATGAAGAAAGGCGTTTGTCTGCTATTCTGTCCTATATTGTTACCATTCTTACAGGTGTTTAGGGAGGACTACCAGGTATAACAACGAGCTTGTAAAGGGATACAAATGTCAGAAAGGTGACAATGATGGAATAGTCTGTCTTTCGATTGGAACAAATTTAGACTTTCAATGACAATATCACAGTTTGttccattttttgttgttgccacaTTGGGGGATTTACCTTTTCATCAGCTACGTCATTTTTCTGGATGATTGACAATCATTAATCTGACTATCCGAAACTAAGACGATTGTAAGGTGCAATGAAAGATTAAATATTTTTCCTTCTGTTTGATTTTGACTTCCTATATCATTCAGTTACAGATAAGATACCAGGGAGTTAAACTGAACCTCAATGATcacctccttcctttcctccataTAAAACAACTTCATGGTAAAATAAATCTGAATCGTAAACTGTTCACGTTCCTACTACTCCGCCCACACTGTGATTCGTGAAtgaaaacagcagcagtaaaaaaaaacagaagaaaTGCTAGGTACTATACTTTTCTTATAAACAAAACttttataaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271659 True 3330 lncRNA 0.32 1 24305682 24309011

Neighbor

gene id symbol gene type direction distance location
LOC110514890 LOC106580679 coding downstream 19064 24259081 ~ 24286618 (-)
gpatch4 gpatch4 coding downstream 83955 24217505 ~ 24221727 (-)
LOC110514831 nes coding downstream 106869 24189209 ~ 24198813 (-)
LOC118947709 NA coding downstream 226829 24067930 ~ 24078853 (-)
LOC110514815 LOC106580773 coding downstream 325382 23975874 ~ 23980300 (-)
LOC110514944 LOC106580659 coding upstream 4544 24313555 ~ 24323816 (-)
LOC110514960 raa2a coding upstream 11733 24320744 ~ 24330914 (-)
mapip LOC106580651 coding upstream 22515 24331526 ~ 24336143 (-)
LOC110514914 LOC106605242 coding upstream 27713 24336724 ~ 24342873 (-)
LOC110514995 LOC106580635 coding upstream 52472 24361483 ~ 24378365 (-)
G237714 LOC106605309 non-coding downstream 5029 24300193 ~ 24300653 (-)
G237705 NA non-coding downstream 19892 24285557 ~ 24285790 (-)
G237703 NA non-coding downstream 21253 24284199 ~ 24284429 (-)
G237701 LOC106605310 non-coding downstream 49217 24255885 ~ 24256465 (-)
G237663 NA non-coding downstream 105738 24199648 ~ 24199944 (-)
G237732 NA non-coding upstream 40095 24349106 ~ 24349359 (-)
G237828 NA non-coding upstream 205100 24514111 ~ 24514321 (-)
G237829 NA non-coding upstream 206184 24515195 ~ 24515433 (-)
G237837 NA non-coding upstream 217773 24526784 ~ 24526988 (-)
G237838 NA non-coding upstream 218289 24527300 ~ 24527563 (-)
G237657 LOC106605316 other downstream 121718 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 525547 23771511 ~ 23780158 (-)
G237047 NA other downstream 1116651 23157109 ~ 23189031 (-)
G235881 NA other downstream 1730693 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 2550181 21744425 ~ 21755710 (-)
G237832 NA other upstream 212208 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 460551 24767049 ~ 24799511 (-)
LOC110515208 LOC106581894 other upstream 627505 24936516 ~ 25052970 (-)
LOC110515384 LOC106582009 other upstream 890077 25171287 ~ 25236536 (-)
LOC110515750 LOC106582146 other upstream 1514345 25822812 ~ 25825108 (-)

Expression


Co-expression Network