G236988


Basic Information

Item Value
gene id G236988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24516443 ~ 24516932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270835
ctgtagatctctgcagttcacccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacagcaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttcctcgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270835 True 490 lncRNA 0.51 1 24516443 24516932

Neighbor

gene id symbol gene type direction distance location
LOC118947812 m4a8a coding upstream 164090 24342562 ~ 24352353 (+)
LOC110514930 LOC106605309 coding upstream 203031 24299707 ~ 24313412 (+)
LOC110514864 LOC106580670 coding upstream 256896 24226912 ~ 24261294 (+)
LOC110505138 LOC106580604 coding upstream 308814 24204483 ~ 24207629 (+)
LOC110503950 LOC106605316 coding upstream 332187 24105516 ~ 24184256 (+)
LOC110515127 LOC106581815 coding downstream 194551 24711483 ~ 24718629 (+)
LOC110515164 LOC106581855 coding downstream 300643 24817575 ~ 24819244 (+)
LOC110503966 LOC106581868 coding downstream 330595 24847527 ~ 24876184 (+)
LOC118948035 LOC106605281 coding downstream 457694 24974626 ~ 24976484 (+)
LOC110515267 LOC106605278 coding downstream 559407 25076339 ~ 25101218 (+)
G236987 NA non-coding upstream 37 24516091 ~ 24516406 (+)
G236986 NA non-coding upstream 1336 24514811 ~ 24515107 (+)
G236981 NA non-coding upstream 6942 24508870 ~ 24509501 (+)
G236977 NA non-coding upstream 11541 24504642 ~ 24504902 (+)
G236974 NA non-coding upstream 14954 24501229 ~ 24501489 (+)
G236989 NA non-coding downstream 314 24517246 ~ 24517451 (+)
G236990 NA non-coding downstream 2768 24519700 ~ 24519986 (+)
G237843 NA non-coding downstream 13966 24530898 ~ 24531207 (+)
G237845 LOC106605297 non-coding downstream 15603 24532535 ~ 24532944 (+)
G237855 NA non-coding downstream 27233 24544165 ~ 24549757 (+)
G236753 NA other upstream 460776 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 587356 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 721248 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 1165628 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 1167065 23346880 ~ 23349378 (+)
G238034 NA other downstream 232473 24749405 ~ 24750383 (+)
G238047 NA other downstream 248734 24765666 ~ 24766363 (+)
G238050 NA other downstream 258347 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 678355 25195287 ~ 25199234 (+)
G239026 NA other downstream 1023837 25540769 ~ 25541613 (+)

Expression


Co-expression Network