G237849


Basic Information

Item Value
gene id G237849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24529818 ~ 24530717 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU271789
ccAACACTATAaacaacatgaaaacagcctaaccagctattctagggcgagtaaaatggtcagagtgaggtttTCTCCTATTTGTGtcttgaagtagctagcaagctagtcaactttagccagttagtttGGGTGCATGACTTGtgagatcaaccctactcctcagccagagcgtccaaatgctccgagagcgaaacgctctgaatatACAAACAGAGAATCTGACAACGCTCTAAATTATACGAATGTCCAGAGTGCACAAATCACGAACACACCCTAAATAATTACATTTCTGGGGAATTGTCTTTGCTCTGTGACCCTCTTTCTTTTCACTTATATtgtattattttcatattttgaAGCCATTTACACCAAAGTAGCGTAAGATATCAAAAATCACTCTAAAAGACATTATGGGGATGTTTTCTAGATGTTTTGGGGATTTTATATATCTTAATTTGCCATAGCAGTTTTGATTTTGATCAGTATCCTCTCATAACTGACCAACAATGTCTCCTCTTACGCTGTGGTTCATGTTCCGTGTCCCCTTAACTGTGTCTTTGCCTAAGAAACGGTTCACAAAGTTACGTTCTCTACTTAATTTGTTCTTGTTCTCTAAAGCACTGCAGTTTGATTTGATCTCTTCTGTGCTATTAACCCCACTACTCAGATTTCCAGTGTTACTGATGCCATTTCTATGCTCACCGATCCATATCTGTGATTCATAACCCTATATTCAATGGAATGCCTATTCTTTGGTACCAGTCCCTGTCTCTCATATTGTTACAACCGAGATGTATGGCTGTTAAATAGTTATAATTCTGCTTTATTAAAATTAATTAGATGGGAATATATTTACCTCTAGGGCTTTCTGAAAATATACACTCATCTAAATGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271789 True 900 lncRNA 0.38 1 24529818 24530717

Neighbor

gene id symbol gene type direction distance location
LOC110515020 LOC106581398 coding downstream 30833 24400704 ~ 24498985 (-)
LOC118944659 LOC106581364 coding downstream 45398 24483236 ~ 24484420 (-)
LOC110515008 LOC106605295 coding downstream 138703 24389041 ~ 24391115 (-)
LOC110514995 LOC106580635 coding downstream 151453 24361483 ~ 24378365 (-)
LOC110514973 LOC106580622 coding downstream 151737 24373801 ~ 24378081 (-)
LOC110515051 LOC106581796 coding upstream 34996 24565713 ~ 24576410 (-)
LOC110515085 LOC100380645 coding upstream 71904 24602621 ~ 24619117 (-)
LOC110505156 NA coding upstream 115642 24646359 ~ 24647543 (-)
LOC110515097 LOC106605292 coding upstream 127093 24657810 ~ 24712733 (-)
LOC110515141 LOC106581821 coding upstream 196886 24727603 ~ 24765483 (-)
G237840 NA non-coding downstream 1037 24528474 ~ 24528781 (-)
G237838 NA non-coding downstream 2255 24527300 ~ 24527563 (-)
G237837 NA non-coding downstream 2830 24526784 ~ 24526988 (-)
G237829 NA non-coding downstream 14385 24515195 ~ 24515433 (-)
G237828 NA non-coding downstream 15497 24514111 ~ 24514321 (-)
G237850 NA non-coding upstream 998 24531715 ~ 24532048 (-)
G237851 NA non-coding upstream 3841 24534558 ~ 24534861 (-)
G237862 NA non-coding upstream 21398 24552115 ~ 24552374 (-)
G237863 NA non-coding upstream 21976 24552693 ~ 24552980 (-)
G237877 NA non-coding upstream 29615 24560332 ~ 24560576 (-)
G237832 NA other downstream 8274 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 345854 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 749683 23771511 ~ 23780158 (-)
G237047 NA other downstream 1340787 23157109 ~ 23189031 (-)
G235881 NA other downstream 1954829 22573833 ~ 22574989 (-)
LOC110515154 LOC106605289 other upstream 238845 24767049 ~ 24799511 (-)
LOC110515208 LOC106581894 other upstream 405799 24936516 ~ 25052970 (-)
LOC110515384 LOC106582009 other upstream 668371 25171287 ~ 25236536 (-)
LOC110515750 LOC106582146 other upstream 1292639 25822812 ~ 25825108 (-)
G240409 NA other upstream 2038384 26569101 ~ 26569522 (-)

Expression


Co-expression Network