G237856


Basic Information

Item Value
gene id G237856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24545197 ~ 24550845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU271797
ttggaatcgaatttaggccgctcaaatcagctctgacttcagtcagtgttctagaaggaattggggctggggtgcaatgtgtaaggcggtgccaaggtgtgcctgatttacctttgacctggactgagtgtgaagtaacctccttcacttcgtacggtccagtccacctgggttccagccactttctcttgtggactgtaaccctcaccccgtcaccaacctttaccttcagtagtggcgtgtcccccggcagctccccctcctggaccttgtgaacctgggtagagagtgctgcagcgagaaccgtcagttttttcacataattagacattacaatttgttgtacatcaagggcgggcatatgacctccctcccttggtggaccatgcatgactctaccagtcattatcccatgaggcacatactttagctatcttagcttttgcttttggtttgacgttccaccagattttgggattggggcctgtacacagatccaaatctgtgggttatgccaaatctttcttccacctgtctcaggtgtttgttaaatgtaagccatttgtcaaatttgatttgtcttgggatgccatacctgggtattagtttggtttgtagccacttaaagactgacctagcatcctccccttttgttattattgcctctacccatttggagaacctatctactatgactaggagatagagtttgcctttagatacattttcggggcccatgtcggtgtagtctatactaatatcctgaaaacatgcattaggtattacgtatgagcccattggtgtttgatatggtttctttgggttgtgtctgtcacaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106589496

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU271797 True 838 lncRNA 0.34 2 24545197 24550845

Neighbor

gene id symbol gene type direction distance location
LOC118947812 m4a8a coding upstream 192844 24342562 ~ 24352353 (+)
LOC110514930 LOC106605309 coding upstream 231785 24299707 ~ 24313412 (+)
LOC110514864 LOC106580670 coding upstream 285650 24226912 ~ 24261294 (+)
LOC110505138 LOC106580604 coding upstream 337568 24204483 ~ 24207629 (+)
LOC110503950 LOC106605316 coding upstream 360941 24105516 ~ 24184256 (+)
LOC110515127 LOC106581815 coding downstream 160638 24711483 ~ 24718629 (+)
LOC110515164 LOC106581855 coding downstream 266730 24817575 ~ 24819244 (+)
LOC110503966 LOC106581868 coding downstream 296682 24847527 ~ 24876184 (+)
LOC118948035 LOC106605281 coding downstream 423781 24974626 ~ 24976484 (+)
LOC110515267 LOC106605278 coding downstream 525494 25076339 ~ 25101218 (+)
G237845 LOC106605297 non-coding upstream 12253 24532535 ~ 24532944 (+)
G237843 NA non-coding upstream 13990 24530898 ~ 24531207 (+)
G236990 NA non-coding upstream 25211 24519700 ~ 24519986 (+)
G236989 NA non-coding upstream 27746 24517246 ~ 24517451 (+)
G236988 NA non-coding upstream 28265 24516443 ~ 24516932 (+)
G237869 NA non-coding downstream 6396 24557241 ~ 24557538 (+)
G237920 NA non-coding downstream 43505 24594350 ~ 24594705 (+)
G237930 NA non-coding downstream 50829 24601674 ~ 24601879 (+)
G237949 NA non-coding downstream 75377 24626222 ~ 24663024 (+)
G237959 NA non-coding downstream 97569 24648414 ~ 24654966 (+)
G236753 NA other upstream 489530 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 616110 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 750002 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 1194382 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 1195819 23346880 ~ 23349378 (+)
G238034 NA other downstream 198560 24749405 ~ 24750383 (+)
G238047 NA other downstream 214821 24765666 ~ 24766363 (+)
G238050 NA other downstream 224434 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 644442 25195287 ~ 25199234 (+)
G239026 NA other downstream 989924 25540769 ~ 25541613 (+)

Expression


Co-expression Network