G237877



Basic Information


Item Value
gene id G237877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24560332 ~ 24560576 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU271818
ataaactcagcaaagaaagaaacgtccctttttcaggaccctgtctttcaaagataattagtaaaaatacaaataacttcacagatcttcattgtaaagggttaaaaACTGTTTCCTatacttgttcaatgaaccataaacaattaatgaacatgcacctgtggaacggtcgttaagacactaacagcttaggcaattaggcaattaaggtcacagttatgaaaacttagaacactaaagaggcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU271818 True 245 lncRNA 0.45 1 24560332 24560576

Neighbor


gene id symbol gene type direction distance location
LOC110515020 LOC106581398 coding downstream 61347 24400704 ~ 24498985 (-)
LOC118944659 LOC106581364 coding downstream 75912 24483236 ~ 24484420 (-)
LOC110515008 LOC106605295 coding downstream 169217 24389041 ~ 24391115 (-)
LOC110514995 LOC106580635 coding downstream 181967 24361483 ~ 24378365 (-)
LOC110514973 LOC106580622 coding downstream 182251 24373801 ~ 24378081 (-)
LOC110515051 LOC106581796 coding upstream 5137 24565713 ~ 24576410 (-)
LOC110515085 LOC100380645 coding upstream 42045 24602621 ~ 24619117 (-)
LOC110505156 NA coding upstream 85783 24646359 ~ 24647543 (-)
LOC110515097 LOC106605292 coding upstream 97234 24657810 ~ 24712733 (-)
LOC110515141 LOC106581821 coding upstream 167027 24727603 ~ 24765483 (-)
G237863 NA non-coding downstream 7352 24552693 ~ 24552980 (-)
G237862 NA non-coding downstream 7958 24552115 ~ 24552374 (-)
G237851 NA non-coding downstream 25471 24534558 ~ 24534861 (-)
G237850 NA non-coding downstream 28284 24531715 ~ 24532048 (-)
G237849 NA non-coding downstream 29615 24529818 ~ 24530717 (-)
G238315 LOC106581815 non-coding upstream 157162 24717738 ~ 24718558 (-)
G238316 NA non-coding upstream 159160 24719736 ~ 24719969 (-)
LOC110515154 LOC106605289 non-coding upstream 206627 24767049 ~ 24799511 (-)
G238414 NA non-coding upstream 368223 24928799 ~ 24931448 (-)
G237832 NA other downstream 38788 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 376368 24180556 ~ 24183964 (-)
LOC110514600 ensa other downstream 780197 23771511 ~ 23780158 (-)
G237047 NA other downstream 1371301 23157109 ~ 23189031 (-)
G235881 NA other downstream 1985343 22573833 ~ 22574989 (-)
LOC110515208 LOC106581894 other upstream 375940 24936516 ~ 25052970 (-)
LOC110515384 LOC106582009 other upstream 638512 25171287 ~ 25236536 (-)
LOC110515750 LOC106582146 other upstream 1262780 25822812 ~ 25825108 (-)
G240409 NA other upstream 2008525 26569101 ~ 26569522 (-)

Expression



Co-expression Network