G238000


Basic Information

Item Value
gene id G238000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24719444 ~ 24719699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU271957
cacatctgtagccatgaaatgttttgaaaggctggtcatggctaacatcatcatcccagaaaccctggaccgGCTCCGGTTTACATACtgcccaacagatccacatatgatgcaatctctattgcactccacactgccctcgaCAAAAGGatcacctacgtgagaatgctgttcattgactacagctcagcgttcaacaccatagtgccctccaagctcatcactaagctaaggatccttgGACTGAACatgtccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271957 True 256 lncRNA 0.62 1 24719444 24719699

Neighbor

gene id symbol gene type direction distance location
LOC110515127 LOC106581815 coding upstream 815 24711483 ~ 24718629 (+)
LOC118947812 m4a8a coding upstream 367091 24342562 ~ 24352353 (+)
LOC110514930 LOC106605309 coding upstream 406032 24299707 ~ 24313412 (+)
LOC110514864 LOC106580670 coding upstream 459897 24226912 ~ 24261294 (+)
LOC110505138 LOC106580604 coding upstream 511815 24204483 ~ 24207629 (+)
LOC110515164 LOC106581855 coding downstream 97876 24817575 ~ 24819244 (+)
LOC110503966 LOC106581868 coding downstream 127828 24847527 ~ 24876184 (+)
LOC118948035 LOC106605281 coding downstream 254927 24974626 ~ 24976484 (+)
LOC110515267 LOC106605278 coding downstream 356640 25076339 ~ 25101218 (+)
LOC110515353 pbx2 coding downstream 392940 25112639 ~ 25119442 (+)
G237949 NA non-coding upstream 56420 24626222 ~ 24663024 (+)
G237959 NA non-coding upstream 64478 24648414 ~ 24654966 (+)
G237930 NA non-coding upstream 117565 24601674 ~ 24601879 (+)
G237920 NA non-coding upstream 124739 24594350 ~ 24594705 (+)
G238007 NA non-coding downstream 7411 24727110 ~ 24727361 (+)
G238009 LOC106581821 non-coding downstream 10630 24730329 ~ 24730646 (+)
G238015 NA non-coding downstream 17120 24736819 ~ 24737202 (+)
G237983 NA non-coding downstream 43999 24763698 ~ 24764191 (+)
G237984 NA non-coding downstream 45111 24764810 ~ 24765352 (+)
G236753 NA other upstream 663777 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 790357 23908750 ~ 23932207 (+)
LOC110514613 hormad1 other upstream 924249 23780400 ~ 23795199 (+)
G236372 LOC106581434 other upstream 1368629 23350091 ~ 23350815 (+)
G236370 LOC106581434 other upstream 1370066 23346880 ~ 23349378 (+)
G238034 NA other downstream 29706 24749405 ~ 24750383 (+)
G238047 NA other downstream 45967 24765666 ~ 24766363 (+)
G238050 NA other downstream 55580 24775279 ~ 24775945 (+)
G238540 LOC106582009 other downstream 475588 25195287 ~ 25199234 (+)
G239026 NA other downstream 821070 25540769 ~ 25541613 (+)

Expression


Co-expression Network