Gene
RNA
| Item | Value |
|---|---|
| gene id | G238238 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25109122 ~ 25110592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110515302 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272215 | True | 881 | lncRNA | 0.34 | 3 | 25109122 | 25110592 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515267 | LOC106605278 | coding | upstream | 7904 | 25076339 ~ 25101218 (+) |
| LOC118948035 | LOC106605281 | coding | upstream | 132638 | 24974626 ~ 24976484 (+) |
| LOC110503966 | LOC106581868 | coding | upstream | 232938 | 24847527 ~ 24876184 (+) |
| LOC110515164 | LOC106581855 | coding | upstream | 289878 | 24817575 ~ 24819244 (+) |
| LOC110515127 | LOC106581815 | coding | upstream | 390493 | 24711483 ~ 24718629 (+) |
| LOC110515353 | pbx2 | coding | downstream | 2047 | 25112639 ~ 25119442 (+) |
| LOC110505167 | tap1 | coding | downstream | 16587 | 25127179 ~ 25135494 (+) |
| LOC100136302 | LOC106581989 | coding | downstream | 27164 | 25137756 ~ 25147306 (+) |
| LOC110515374 | NA | coding | downstream | 45784 | 25156376 ~ 25161150 (+) |
| vmo1b | vmo1 | coding | downstream | 51648 | 25162240 ~ 25165365 (+) |
| G238129 | NA | non-coding | upstream | 155647 | 24937604 ~ 24953475 (+) |
| G238029 | NA | non-coding | upstream | 203605 | 24904299 ~ 24905517 (+) |
| G238033 | NA | non-coding | upstream | 223661 | 24854769 ~ 24885461 (+) |
| G238028 | NA | non-coding | upstream | 300242 | 24808437 ~ 24808880 (+) |
| G238052 | LOC106581836 | non-coding | upstream | 332234 | 24776660 ~ 24776888 (+) |
| G238196 | LOC106581966 | non-coding | downstream | 9754 | 25120346 ~ 25120658 (+) |
| G238194 | NA | non-coding | downstream | 10280 | 25120872 ~ 25121188 (+) |
| G238197 | NA | non-coding | downstream | 12060 | 25122652 ~ 25122955 (+) |
| G238198 | NA | non-coding | downstream | 12541 | 25123133 ~ 25123346 (+) |
| G238195 | NA | non-coding | downstream | 12874 | 25123466 ~ 25123783 (+) |
| G238050 | NA | other | upstream | 333177 | 24775279 ~ 24775945 (+) |
| G238047 | NA | other | upstream | 342759 | 24765666 ~ 24766363 (+) |
| G238034 | NA | other | upstream | 358739 | 24749405 ~ 24750383 (+) |
| G236753 | NA | other | upstream | 1053455 | 24055319 ~ 24055667 (+) |
| LOC110514733 | LOC106580799 | other | upstream | 1180035 | 23908750 ~ 23932207 (+) |
| G238540 | LOC106582009 | other | downstream | 84695 | 25195287 ~ 25199234 (+) |
| G239026 | NA | other | downstream | 430177 | 25540769 ~ 25541613 (+) |
| G239697 | LOC106582257 | other | downstream | 1103050 | 26213642 ~ 26220183 (+) |
| G239752 | meox2 | other | downstream | 1216816 | 26327408 ~ 26328331 (+) |
| G240244 | NA | other | downstream | 1940594 | 27051186 ~ 27051954 (+) |
