G238198


Basic Information

Item Value
gene id G238198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25123133 ~ 25123346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU272169
TCTTTTTCCTCAACTgggtcctcctctctcccccctattTCCTCCCCAACCCCTCTTACACTAATAATGGCCTTTAATTCTGGGTGAGAGGGGACTGACACACGAGTCGACGACGTAGCAGCCCGCAGGAAGTTAGCTGCTTCGATGGCGTACGGGAAACAGGTAGAAGGAAGATGGGAGCACGGCCTGTTATCCACTTGCAGGAATAGGAGAG

Function

NR:

description
NOTCH-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272169 True 214 lncRNA 0.39 1 25123133 25123346

Neighbor

gene id symbol gene type direction distance location
LOC110515353 pbx2 coding upstream 3691 25112639 ~ 25119442 (+)
LOC110515267 LOC106605278 coding upstream 21915 25076339 ~ 25101218 (+)
LOC118948035 LOC106605281 coding upstream 146649 24974626 ~ 24976484 (+)
LOC110503966 LOC106581868 coding upstream 246949 24847527 ~ 24876184 (+)
LOC110515164 LOC106581855 coding upstream 303889 24817575 ~ 24819244 (+)
LOC110505167 tap1 coding downstream 3833 25127179 ~ 25135494 (+)
LOC100136302 LOC106581989 coding downstream 14410 25137756 ~ 25147306 (+)
LOC110515374 NA coding downstream 33030 25156376 ~ 25161150 (+)
vmo1b vmo1 coding downstream 38894 25162240 ~ 25165365 (+)
LOC110515419 LOC106582023 coding downstream 139527 25262873 ~ 25270428 (+)
G238197 NA non-coding upstream 178 25122652 ~ 25122955 (+)
G238194 NA non-coding upstream 1945 25120872 ~ 25121188 (+)
G238196 LOC106581966 non-coding upstream 2475 25120346 ~ 25120658 (+)
G238238 NA non-coding upstream 12541 25109122 ~ 25110592 (+)
G238129 NA non-coding upstream 169658 24937604 ~ 24953475 (+)
G238195 NA non-coding downstream 120 25123466 ~ 25123783 (+)
G238199 NA non-coding downstream 1731 25125077 ~ 25125397 (+)
G238243 NA non-coding downstream 3015 25126361 ~ 25126677 (+)
G238246 NA non-coding downstream 9694 25133040 ~ 25133241 (+)
G238050 NA other upstream 347188 24775279 ~ 24775945 (+)
G238047 NA other upstream 356770 24765666 ~ 24766363 (+)
G238034 NA other upstream 372750 24749405 ~ 24750383 (+)
G236753 NA other upstream 1067466 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 1194046 23908750 ~ 23932207 (+)
G238540 LOC106582009 other downstream 71941 25195287 ~ 25199234 (+)
G239026 NA other downstream 417423 25540769 ~ 25541613 (+)
G239697 LOC106582257 other downstream 1090296 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 1204062 26327408 ~ 26328331 (+)
G240244 NA other downstream 1927840 27051186 ~ 27051954 (+)

Expression


Co-expression Network