G238246


Basic Information

Item Value
gene id G238246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25133040 ~ 25133241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU272231
ctttaagaggctcctctgtcctccactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacactccaaactccactatggccaagaccaaagagctatcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctacaaC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272231 True 202 lncRNA 0.35 1 25133040 25133241

Neighbor

gene id symbol gene type direction distance location
LOC110515353 pbx2 coding upstream 13598 25112639 ~ 25119442 (+)
LOC110515267 LOC106605278 coding upstream 31822 25076339 ~ 25101218 (+)
LOC118948035 LOC106605281 coding upstream 156556 24974626 ~ 24976484 (+)
LOC110503966 LOC106581868 coding upstream 256856 24847527 ~ 24876184 (+)
LOC110515164 LOC106581855 coding upstream 313796 24817575 ~ 24819244 (+)
LOC100136302 LOC106581989 coding downstream 4515 25137756 ~ 25147306 (+)
LOC110515374 NA coding downstream 23135 25156376 ~ 25161150 (+)
vmo1b vmo1 coding downstream 28999 25162240 ~ 25165365 (+)
LOC110515419 LOC106582023 coding downstream 129632 25262873 ~ 25270428 (+)
LOC110515430 LOC106582018 coding downstream 142162 25275403 ~ 25335823 (+)
LOC110505167 tap1 non-coding upstream 1946 25127179 ~ 25135494 (+)
G238243 NA non-coding upstream 6363 25126361 ~ 25126677 (+)
G238199 NA non-coding upstream 7643 25125077 ~ 25125397 (+)
G238195 NA non-coding upstream 9257 25123466 ~ 25123783 (+)
G238198 NA non-coding upstream 9694 25123133 ~ 25123346 (+)
G238506 NA non-coding downstream 14254 25147495 ~ 25147745 (+)
G238519 NA non-coding downstream 41549 25174790 ~ 25175404 (+)
G238521 NA non-coding downstream 43093 25176334 ~ 25176607 (+)
G238524 NA non-coding downstream 45543 25178784 ~ 25179166 (+)
G238525 NA non-coding downstream 46346 25179587 ~ 25179819 (+)
G238050 NA other upstream 357095 24775279 ~ 24775945 (+)
G238047 NA other upstream 366677 24765666 ~ 24766363 (+)
G238034 NA other upstream 382657 24749405 ~ 24750383 (+)
G236753 NA other upstream 1077373 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 1203953 23908750 ~ 23932207 (+)
G238540 LOC106582009 other downstream 62046 25195287 ~ 25199234 (+)
G239026 NA other downstream 407528 25540769 ~ 25541613 (+)
G239697 LOC106582257 other downstream 1080401 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 1194167 26327408 ~ 26328331 (+)
G240244 NA other downstream 1917945 27051186 ~ 27051954 (+)

Expression


Co-expression Network