G238521


Basic Information

Item Value
gene id G238521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25176334 ~ 25176607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU272557
ACTTTGGAAACCATAGCCATTTTCTTGATTGTTACTTTATTTGTAGAGGACAATGCCTGTACCATCGATAAAGAAATCCATGTCACACAAATCAAATTGCCACAAGCTCTTTTAGAAATACTTGGGGTCATTTCAGAGCAAGGAAGAGAGGAATGGAAAATGCAGTTTTGTACtgttaaaattatactgttaaaGTTCCACATGAAGGGGAGCGATCCACACTCCAGGGTAGACCTTATAATGGTTTGTGTGACTAGTATGGTCAGTCCTGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272557 True 274 lncRNA 0.39 1 25176334 25176607

Neighbor

gene id symbol gene type direction distance location
vmo1b vmo1 coding upstream 10969 25162240 ~ 25165365 (+)
LOC110515374 NA coding upstream 15184 25156376 ~ 25161150 (+)
LOC100136302 LOC106581989 coding upstream 29028 25137756 ~ 25147306 (+)
LOC110505167 tap1 coding upstream 40840 25127179 ~ 25135494 (+)
LOC110515353 pbx2 coding upstream 56892 25112639 ~ 25119442 (+)
LOC110515419 LOC106582023 coding downstream 86266 25262873 ~ 25270428 (+)
LOC110515430 LOC106582018 coding downstream 98796 25275403 ~ 25335823 (+)
si:dkey-82o10.4 LOC106582066 coding downstream 386723 25563330 ~ 25566407 (+)
LOC110515550 LOC106582071 coding downstream 400559 25577166 ~ 25584936 (+)
LOC110515597 LOC105021876 coding downstream 540680 25717287 ~ 25747404 (+)
G238519 NA non-coding upstream 930 25174790 ~ 25175404 (+)
G238506 NA non-coding upstream 28589 25147495 ~ 25147745 (+)
G238246 NA non-coding upstream 43093 25133040 ~ 25133241 (+)
G238243 NA non-coding upstream 49657 25126361 ~ 25126677 (+)
G238524 NA non-coding downstream 2177 25178784 ~ 25179166 (+)
G238525 NA non-coding downstream 2980 25179587 ~ 25179819 (+)
G238528 NA non-coding downstream 5753 25182360 ~ 25182791 (+)
G238531 NA non-coding downstream 12963 25189570 ~ 25189773 (+)
G238533 NA non-coding downstream 14061 25190668 ~ 25190913 (+)
G238050 NA other upstream 400389 24775279 ~ 24775945 (+)
G238047 NA other upstream 409971 24765666 ~ 24766363 (+)
G238034 NA other upstream 425951 24749405 ~ 24750383 (+)
G236753 NA other upstream 1120667 24055319 ~ 24055667 (+)
LOC110514733 LOC106580799 other upstream 1247247 23908750 ~ 23932207 (+)
G238540 LOC106582009 other downstream 18680 25195287 ~ 25199234 (+)
G239026 NA other downstream 364162 25540769 ~ 25541613 (+)
G239697 LOC106582257 other downstream 1037035 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 1150801 26327408 ~ 26328331 (+)
G240244 NA other downstream 1874579 27051186 ~ 27051954 (+)

Expression


Co-expression Network