Gene
RNA
| Item | Value |
|---|---|
| gene id | G238588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25178636 ~ 25178846 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272627 | True | 211 | lncRNA | 0.41 | 1 | 25178636 | 25178846 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| notchl | LOC106581966 | coding | downstream | 53194 | 25119183 ~ 25125442 (-) |
| LOC110515302 | LOC106581964 | coding | downstream | 67520 | 25107822 ~ 25111116 (-) |
| LOC110515290 | LOC106581956 | coding | downstream | 72000 | 25101393 ~ 25106636 (-) |
| LOC110515238 | LOC106581944 | coding | downstream | 105972 | 25058594 ~ 25072664 (-) |
| LOC110515208 | LOC106581894 | coding | downstream | 125666 | 24936516 ~ 25052970 (-) |
| LOC110515443 | LOC106605270 | coding | upstream | 287005 | 25465851 ~ 25521829 (-) |
| LOC110515528 | LOC106582056 | coding | upstream | 389193 | 25568039 ~ 25575807 (-) |
| LOC110503974 | NA | coding | upstream | 405095 | 25583941 ~ 25589424 (-) |
| LOC110515569 | LOC106605268 | coding | upstream | 417858 | 25596704 ~ 25643498 (-) |
| LOC110515676 | LOC106582133 | coding | upstream | 621391 | 25800237 ~ 25810648 (-) |
| LOC110515384 | LOC106582009 | non-coding | downstream | 6410 | 25171287 ~ 25236536 (-) |
| G238509 | NA | non-coding | downstream | 28813 | 25149550 ~ 25149823 (-) |
| G238494 | tap1 | non-coding | downstream | 48983 | 25129102 ~ 25129653 (-) |
| G238414 | NA | non-coding | downstream | 247188 | 24928799 ~ 24931448 (-) |
| LOC110515154 | LOC106605289 | non-coding | downstream | 409305 | 24767049 ~ 24799511 (-) |
| G238593 | NA | non-coding | upstream | 10213 | 25189059 ~ 25189309 (-) |
| G238623 | NA | non-coding | upstream | 58826 | 25237672 ~ 25237878 (-) |
| G238624 | NA | non-coding | upstream | 59342 | 25238188 ~ 25238510 (-) |
| G238713 | NA | non-coding | upstream | 88924 | 25267770 ~ 25268121 (-) |
| G238712 | NA | non-coding | upstream | 155105 | 25333951 ~ 25335809 (-) |
| G237832 | NA | other | downstream | 657092 | 24521219 ~ 24521544 (-) |
| G237657 | LOC106605316 | other | downstream | 994672 | 24180556 ~ 24183964 (-) |
| LOC110514600 | ensa | other | downstream | 1398501 | 23771511 ~ 23780158 (-) |
| LOC110515750 | LOC106582146 | other | upstream | 644510 | 25822812 ~ 25825108 (-) |
| G240409 | NA | other | upstream | 1390255 | 26569101 ~ 26569522 (-) |
| G240464 | NA | other | upstream | 1495746 | 26674592 ~ 26675033 (-) |
| LOC110516631 | LOC106582601 | other | upstream | 1892209 | 27070914 ~ 27097259 (-) |
