G238622


Basic Information

Item Value
gene id G238622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25237720 ~ 25237927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU272661
acctttatttaaccaggtgggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcaaagcagtttgacacatacaacaacacagagttacacatggaataaacaaacatacaatcaataatacagtaggaaaatctatatacagtgagtgcaaatgaggtaggataagagaggtaaggcaataaataggcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272661 True 208 lncRNA 0.44 1 25237720 25237927

Neighbor

gene id symbol gene type direction distance location
vmo1b vmo1 coding upstream 72355 25162240 ~ 25165365 (+)
LOC110515374 NA coding upstream 76570 25156376 ~ 25161150 (+)
LOC100136302 LOC106581989 coding upstream 90414 25137756 ~ 25147306 (+)
LOC110505167 tap1 coding upstream 102226 25127179 ~ 25135494 (+)
LOC110515353 pbx2 coding upstream 118278 25112639 ~ 25119442 (+)
LOC110515419 LOC106582023 coding downstream 24946 25262873 ~ 25270428 (+)
LOC110515430 LOC106582018 coding downstream 37476 25275403 ~ 25335823 (+)
si:dkey-82o10.4 LOC106582066 coding downstream 325403 25563330 ~ 25566407 (+)
LOC110515550 LOC106582071 coding downstream 339239 25577166 ~ 25584936 (+)
LOC110515597 LOC105021876 coding downstream 479360 25717287 ~ 25747404 (+)
G238620 NA non-coding upstream 427 25237085 ~ 25237293 (+)
G238534 NA non-coding upstream 46318 25191140 ~ 25191402 (+)
G238533 NA non-coding upstream 46807 25190668 ~ 25190913 (+)
G238531 NA non-coding upstream 47947 25189570 ~ 25189773 (+)
G238528 NA non-coding upstream 54929 25182360 ~ 25182791 (+)
G238774 NA non-coding downstream 120407 25358334 ~ 25358552 (+)
G238790 NA non-coding downstream 132312 25370239 ~ 25370458 (+)
G238916 NA non-coding downstream 224878 25462805 ~ 25463214 (+)
G238923 NA non-coding downstream 226675 25464602 ~ 25464806 (+)
G238937 NA non-coding downstream 256489 25494416 ~ 25495060 (+)
G238540 LOC106582009 other upstream 38486 25195287 ~ 25199234 (+)
G238050 NA other upstream 461775 24775279 ~ 24775945 (+)
G238047 NA other upstream 471357 24765666 ~ 24766363 (+)
G238034 NA other upstream 487337 24749405 ~ 24750383 (+)
G236753 NA other upstream 1182053 24055319 ~ 24055667 (+)
G239026 NA other downstream 302842 25540769 ~ 25541613 (+)
G239697 LOC106582257 other downstream 975715 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 1089481 26327408 ~ 26328331 (+)
G240244 NA other downstream 1813259 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 2018661 27240708 ~ 27264405 (+)

Expression


Co-expression Network