G238790


Basic Information

Item Value
gene id G238790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25370239 ~ 25370458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU272865
ATGAGACTCgagattgagctcaggtgcatcctgtttccattgataatacttgagatgtttctataacttgatttgagtccacctgtggtaaattcaattgattggatttgatttggaaaggcacacctgtctatatatgggcagagcaaaaaccaagccatgaggtgaaaGCAATTGTCCgctgagctccgagacaggattgtgtcgaggcacagatctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272865 True 220 lncRNA 0.31 1 25370239 25370458

Neighbor

gene id symbol gene type direction distance location
LOC110515430 LOC106582018 coding upstream 34416 25275403 ~ 25335823 (+)
LOC110515419 LOC106582023 coding upstream 99811 25262873 ~ 25270428 (+)
vmo1b vmo1 coding upstream 204874 25162240 ~ 25165365 (+)
LOC110515374 NA coding upstream 209089 25156376 ~ 25161150 (+)
LOC100136302 LOC106581989 coding upstream 222933 25137756 ~ 25147306 (+)
si:dkey-82o10.4 LOC106582066 coding downstream 192872 25563330 ~ 25566407 (+)
LOC110515550 LOC106582071 coding downstream 206708 25577166 ~ 25584936 (+)
LOC110515597 LOC105021876 coding downstream 346829 25717287 ~ 25747404 (+)
LOC110515611 LOC106582094 coding downstream 377328 25747786 ~ 25757241 (+)
LOC110515629 LOC106582110 coding downstream 389756 25760214 ~ 25771793 (+)
G238774 NA non-coding upstream 11687 25358334 ~ 25358552 (+)
G238622 NA non-coding upstream 132312 25237720 ~ 25237927 (+)
G238620 NA non-coding upstream 132946 25237085 ~ 25237293 (+)
G238534 NA non-coding upstream 178837 25191140 ~ 25191402 (+)
G238533 NA non-coding upstream 179326 25190668 ~ 25190913 (+)
G238916 NA non-coding downstream 92347 25462805 ~ 25463214 (+)
G238923 NA non-coding downstream 94144 25464602 ~ 25464806 (+)
G238937 NA non-coding downstream 123958 25494416 ~ 25495060 (+)
G239033 NA non-coding downstream 182991 25553449 ~ 25553696 (+)
G239040 NA non-coding downstream 187482 25557940 ~ 25558177 (+)
G238540 LOC106582009 other upstream 171005 25195287 ~ 25199234 (+)
G238050 NA other upstream 594294 24775279 ~ 24775945 (+)
G238047 NA other upstream 603876 24765666 ~ 24766363 (+)
G238034 NA other upstream 619856 24749405 ~ 24750383 (+)
G236753 NA other upstream 1314572 24055319 ~ 24055667 (+)
G239026 NA other downstream 170311 25540769 ~ 25541613 (+)
G239697 LOC106582257 other downstream 843184 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 956950 26327408 ~ 26328331 (+)
G240244 NA other downstream 1680728 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 1886130 27240708 ~ 27264405 (+)

Expression


Co-expression Network