G239033


Basic Information

Item Value
gene id G239033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25553449 ~ 25553696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU273169
caacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttttgaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaagacaatccacctgtgtgtaatcaagtctccgtataaatgcacatgcactgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273169 True 248 lncRNA 0.38 1 25553449 25553696

Neighbor

gene id symbol gene type direction distance location
LOC110515430 LOC106582018 coding upstream 217626 25275403 ~ 25335823 (+)
LOC110515419 LOC106582023 coding upstream 283021 25262873 ~ 25270428 (+)
vmo1b vmo1 coding upstream 388084 25162240 ~ 25165365 (+)
LOC110515374 NA coding upstream 392299 25156376 ~ 25161150 (+)
LOC100136302 LOC106581989 coding upstream 406143 25137756 ~ 25147306 (+)
si:dkey-82o10.4 LOC106582066 coding downstream 9634 25563330 ~ 25566407 (+)
LOC110515550 LOC106582071 coding downstream 23470 25577166 ~ 25584936 (+)
LOC110515597 LOC105021876 coding downstream 163591 25717287 ~ 25747404 (+)
LOC110515611 LOC106582094 coding downstream 194090 25747786 ~ 25757241 (+)
LOC110515629 LOC106582110 coding downstream 206518 25760214 ~ 25771793 (+)
G238937 NA non-coding upstream 58389 25494416 ~ 25495060 (+)
G238923 NA non-coding upstream 88643 25464602 ~ 25464806 (+)
G238916 NA non-coding upstream 90235 25462805 ~ 25463214 (+)
G238790 NA non-coding upstream 182991 25370239 ~ 25370458 (+)
G238774 NA non-coding upstream 194897 25358334 ~ 25358552 (+)
G239040 NA non-coding downstream 4244 25557940 ~ 25558177 (+)
G239043 NA non-coding downstream 7892 25561588 ~ 25561805 (+)
G239073 NA non-coding downstream 37923 25591619 ~ 25591884 (+)
G239196 NA non-coding downstream 130715 25684411 ~ 25684627 (+)
G239217 NA non-coding downstream 155725 25709421 ~ 25709704 (+)
G239026 NA other upstream 11836 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 354215 25195287 ~ 25199234 (+)
G238050 NA other upstream 777504 24775279 ~ 24775945 (+)
G238047 NA other upstream 787086 24765666 ~ 24766363 (+)
G238034 NA other upstream 803066 24749405 ~ 24750383 (+)
G239697 LOC106582257 other downstream 659946 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 773712 26327408 ~ 26328331 (+)
G240244 NA other downstream 1497490 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 1702892 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 2002476 27556172 ~ 27558532 (+)

Expression


Co-expression Network