Gene
RNA
| Item | Value |
|---|---|
| gene id | G239133 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25577220 ~ 25578695 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ras-related protein Rab-5A-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU273272 | True | 511 | lncRNA | 0.43 | 2 | 25577220 | 25578695 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515528 | LOC106582056 | coding | downstream | 1413 | 25568039 ~ 25575807 (-) |
| LOC110515443 | LOC106605270 | coding | downstream | 55391 | 25465851 ~ 25521829 (-) |
| LOC110515384 | LOC106582009 | coding | downstream | 340684 | 25171287 ~ 25236536 (-) |
| notchl | LOC106581966 | coding | downstream | 451778 | 25119183 ~ 25125442 (-) |
| LOC110515302 | LOC106581964 | coding | downstream | 466104 | 25107822 ~ 25111116 (-) |
| LOC110503974 | NA | coding | upstream | 5246 | 25583941 ~ 25589424 (-) |
| LOC110515569 | LOC106605268 | coding | upstream | 18009 | 25596704 ~ 25643498 (-) |
| LOC110515676 | LOC106582133 | coding | upstream | 221542 | 25800237 ~ 25810648 (-) |
| LOC110515750 | LOC106582146 | coding | upstream | 244117 | 25822812 ~ 25825108 (-) |
| LOC110515765 | LOC106582155 | coding | upstream | 258942 | 25837637 ~ 25854424 (-) |
| G239050 | NA | non-coding | downstream | 35816 | 25540874 ~ 25541404 (-) |
| G238922 | NA | non-coding | downstream | 112673 | 25464226 ~ 25464547 (-) |
| G238816 | NA | non-coding | downstream | 184590 | 25392404 ~ 25392630 (-) |
| G238802 | NA | non-coding | downstream | 195469 | 25381521 ~ 25381751 (-) |
| G238798 | NA | non-coding | downstream | 199519 | 25377475 ~ 25377701 (-) |
| G239138 | NA | non-coding | upstream | 12656 | 25591351 ~ 25591550 (-) |
| G239402 | NA | non-coding | upstream | 232510 | 25811205 ~ 25813187 (-) |
| G239480 | pngf | non-coding | upstream | 253317 | 25832012 ~ 25834240 (-) |
| G239502 | NA | non-coding | upstream | 296116 | 25874811 ~ 25875963 (-) |
| LOC110515208 | LOC106581894 | other | downstream | 611012 | 24936516 ~ 25052970 (-) |
| LOC110515154 | LOC106605289 | other | downstream | 806897 | 24767049 ~ 24799511 (-) |
| G237832 | NA | other | downstream | 1055676 | 24521219 ~ 24521544 (-) |
| G237657 | LOC106605316 | other | downstream | 1393256 | 24180556 ~ 24183964 (-) |
| G240409 | NA | other | upstream | 990406 | 26569101 ~ 26569522 (-) |
| G240464 | NA | other | upstream | 1095897 | 26674592 ~ 26675033 (-) |
| LOC110516631 | LOC106582601 | other | upstream | 1492360 | 27070914 ~ 27097259 (-) |
| LOC110516667 | LOC106582624 | other | upstream | 1533487 | 27111084 ~ 27127488 (-) |
