G239480 (pngf)


Basic Information

Item Value
gene id G239480
gene name pngf
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25832012 ~ 25834240 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU273664
TACATAAAGAGACCTATGTGActgtgtctcaatgtaatcaaggtataaaATGATTATGGTATTGTGAAATACAGTATCTACTTGGGCTTACTTACGGTGTAAAAACAATAATGTTCCACCTCCCCCAGCCCATCCAATTAGAAGAAAAATCATCCCACGGTTCAATTTAATTGCCCTCAGAGGAATACAAACTCATGCTAATGTAACTATGGCCCAGACTAAGGGAAGATTATATGAATCTGCATGACCAAACTCTAACGGTAGTCATTTCGCACCTGCCGAGTCAAAAATACGGGTGTTATTGAATGCTCCGTTGACGAGGAAGTGGTGTGATGTCACACAGAACTCGCAGCAGCCGTTCTCGTCGCTCCCGTGGCCTGTGATTACGGCATACAACTCCACCTTTTTGTTGAGTCTGGGACAGTGAATTTGATTGGTTGGTATCTCTTGTTGTATTCCTTGTCAAAGGTGCCTCCACTGTACAATGACATCAGCTTAAAGGGGTAAAGCTTGTCTGAGTGATTGGTTGAGTGATTTGTGTGGCTGAATCTCAGACTCAGAGACACCACCCAGGGCATAGCCCAAGGCACAGTCTTCATGGTGAAGGTACATCTCCCATTGTCCAACAGAGGCACCAGAGGAGAAACATCAGTGAGCCAGCGCCCAATGCCTCTGGGGGAGGAACATTAACATTGTTAAAAGAATTTGCAGGAACGTTTCTTTAAGCCAAAGGGGATCACTTTGAAGTGGTAAAGGCCATAGGCACAGAGGTAAAAGGCCCAGTGGAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273664 True 789 lncRNA 0.48 3 25832012 25834240

Neighbor

gene id symbol gene type direction distance location
LOC110515750 LOC106582146 coding downstream 6904 25822812 ~ 25825108 (-)
LOC110515676 LOC106582133 coding downstream 21364 25800237 ~ 25810648 (-)
LOC110515569 LOC106605268 coding downstream 188514 25596704 ~ 25643498 (-)
LOC110503974 NA coding downstream 242588 25583941 ~ 25589424 (-)
LOC110515528 LOC106582056 coding downstream 256205 25568039 ~ 25575807 (-)
LOC110515765 LOC106582155 coding upstream 3397 25837637 ~ 25854424 (-)
ica1 LOC106582178 coding upstream 49578 25883818 ~ 25895863 (-)
LOC110515870 LOC106584533 coding upstream 77467 25911707 ~ 25918481 (-)
LOC110515882 LOC106582184 coding upstream 84675 25918915 ~ 26024557 (-)
LOC110515898 LOC106582196 coding upstream 236816 26071056 ~ 26094219 (-)
G239402 NA non-coding downstream 18825 25811205 ~ 25813187 (-)
G239138 NA non-coding downstream 240462 25591351 ~ 25591550 (-)
G239133 NA non-coding downstream 253317 25577220 ~ 25578695 (-)
G239050 NA non-coding downstream 290608 25540874 ~ 25541404 (-)
G239502 NA non-coding upstream 40571 25874811 ~ 25875963 (-)
G239504 NA non-coding upstream 64578 25898818 ~ 25899130 (-)
G239519 NA non-coding upstream 101983 25936223 ~ 25936711 (-)
G239515 NA non-coding upstream 221335 26055575 ~ 26057001 (-)
LOC110515384 LOC106582009 other downstream 595645 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 865804 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1061689 24767049 ~ 24799511 (-)
G237832 NA other downstream 1310468 24521219 ~ 24521544 (-)
G240409 NA other upstream 734861 26569101 ~ 26569522 (-)
G240464 NA other upstream 840352 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 1236815 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 1277942 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 1321328 27154680 ~ 27159987 (-)

Expression


Co-expression Network