Gene
RNA
| Item | Value |
|---|---|
| gene id | G239295 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25887490 ~ 25887835 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| islet cell autoantigen 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU273452 | True | 244 | lncRNA | 0.41 | 2 | 25887490 | 25887835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515810 | LOC106582161 | coding | upstream | 4202 | 25866173 ~ 25883288 (+) |
| LOC110515778 | LOC106582151 | coding | upstream | 21958 | 25855355 ~ 25865532 (+) |
| si:dkey-256h2.1 | pngf | coding | upstream | 49650 | 25825181 ~ 25837840 (+) |
| LOC110515724 | LOC106582140 | coding | upstream | 64369 | 25811027 ~ 25823121 (+) |
| LOC110515656 | LOC106582123 | coding | upstream | 87267 | 25782275 ~ 25800223 (+) |
| LOC110515888 | LOC106582194 | coding | downstream | 161486 | 26049321 ~ 26057011 (+) |
| LOC110515914 | LOC106582211 | coding | downstream | 180707 | 26068542 ~ 26070879 (+) |
| LOC110515923 | LOC106582214 | coding | downstream | 227447 | 26115282 ~ 26117797 (+) |
| LOC110516043 | LOC106584540 | coding | downstream | 515161 | 26402996 ~ 26406411 (+) |
| apom | apom | coding | downstream | 550318 | 26438153 ~ 26446090 (+) |
| G239280 | LOC106582155 | non-coding | upstream | 47317 | 25839602 ~ 25840173 (+) |
| LOC110515597 | LOC105021876 | non-coding | upstream | 140092 | 25717287 ~ 25747404 (+) |
| G239217 | NA | non-coding | upstream | 177786 | 25709421 ~ 25709704 (+) |
| G239196 | NA | non-coding | upstream | 202863 | 25684411 ~ 25684627 (+) |
| G239073 | NA | non-coding | upstream | 295606 | 25591619 ~ 25591884 (+) |
| G239296 | NA | non-coding | downstream | 4449 | 25892284 ~ 25894425 (+) |
| G239321 | LOC106582184 | non-coding | downstream | 58960 | 25946795 ~ 25947982 (+) |
| G239604 | LOC106582196 | non-coding | downstream | 186613 | 26074448 ~ 26075042 (+) |
| G239606 | LOC106582196 | non-coding | downstream | 188772 | 26076607 ~ 26076867 (+) |
| G239610 | NA | non-coding | downstream | 194670 | 26082505 ~ 26082711 (+) |
| G239026 | NA | other | upstream | 345877 | 25540769 ~ 25541613 (+) |
| G238540 | LOC106582009 | other | upstream | 688256 | 25195287 ~ 25199234 (+) |
| G238050 | NA | other | upstream | 1111545 | 24775279 ~ 24775945 (+) |
| G238047 | NA | other | upstream | 1121127 | 24765666 ~ 24766363 (+) |
| G238034 | NA | other | upstream | 1137107 | 24749405 ~ 24750383 (+) |
| G239697 | LOC106582257 | other | downstream | 325807 | 26213642 ~ 26220183 (+) |
| G239752 | meox2 | other | downstream | 439573 | 26327408 ~ 26328331 (+) |
| G240244 | NA | other | downstream | 1163351 | 27051186 ~ 27051954 (+) |
| LOC110516767 | LOC106605158 | other | downstream | 1368753 | 27240708 ~ 27264405 (+) |
| G241150 | LOC106582751 | other | downstream | 1668337 | 27556172 ~ 27558532 (+) |
