G239321 (LOC106582184)


Basic Information

Item Value
gene id G239321
gene name LOC106582184
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25946795 ~ 25947982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU273493
GCGGGTCTGGACGCCCTCTCCACAGTTCTCCTTCAGGTCCAAGTTGCTGACCTTCCACACACTCCAGGGTTCAGCCACCCACACATACTGACTGCAGTCACTAATACAGGGCACAACCTCGTACACCTGGGCCTGGTTGATGTGATCCAGTTTGGGGCAGGGTCGCCCTCCGTTGTAGGGTTTCTCCCGGAGCCACTTGGAACGCACTTTGACCCCGCTACCACATGACTTGCTGCAGCGGGACCAGTTGGACCACTCGCTGAGCTTACAGTCTGACGGACAGGGGATGATGCATG

Function

NR:

description
PREDICTED: thrombospondin type-1 domain-containing protein 7A-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273493 True 296 lncRNA 0.34 2 25946795 25947982

Neighbor

gene id symbol gene type direction distance location
LOC110515810 LOC106582161 coding upstream 63507 25866173 ~ 25883288 (+)
LOC110515778 LOC106582151 coding upstream 81263 25855355 ~ 25865532 (+)
si:dkey-256h2.1 pngf coding upstream 108955 25825181 ~ 25837840 (+)
LOC110515724 LOC106582140 coding upstream 123674 25811027 ~ 25823121 (+)
LOC110515656 LOC106582123 coding upstream 146572 25782275 ~ 25800223 (+)
LOC110515888 LOC106582194 coding downstream 101339 26049321 ~ 26057011 (+)
LOC110515914 LOC106582211 coding downstream 120560 26068542 ~ 26070879 (+)
LOC110515923 LOC106582214 coding downstream 167300 26115282 ~ 26117797 (+)
LOC110516043 LOC106584540 coding downstream 455014 26402996 ~ 26406411 (+)
apom apom coding downstream 490171 26438153 ~ 26446090 (+)
G239296 NA non-coding upstream 52370 25892284 ~ 25894425 (+)
G239295 NA non-coding upstream 58960 25887490 ~ 25887835 (+)
G239280 LOC106582155 non-coding upstream 106622 25839602 ~ 25840173 (+)
LOC110515597 LOC105021876 non-coding upstream 199397 25717287 ~ 25747404 (+)
G239217 NA non-coding upstream 237091 25709421 ~ 25709704 (+)
G239604 LOC106582196 non-coding downstream 126466 26074448 ~ 26075042 (+)
G239606 LOC106582196 non-coding downstream 128625 26076607 ~ 26076867 (+)
G239610 NA non-coding downstream 134523 26082505 ~ 26082711 (+)
G239617 NA non-coding downstream 143000 26090982 ~ 26114432 (+)
G239653 NA non-coding downstream 196904 26144886 ~ 26145115 (+)
G239026 NA other upstream 405182 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 747561 25195287 ~ 25199234 (+)
G238050 NA other upstream 1170850 24775279 ~ 24775945 (+)
G238047 NA other upstream 1180432 24765666 ~ 24766363 (+)
G238034 NA other upstream 1196412 24749405 ~ 24750383 (+)
G239697 LOC106582257 other downstream 265660 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 379426 26327408 ~ 26328331 (+)
G240244 NA other downstream 1103204 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 1308606 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 1608190 27556172 ~ 27558532 (+)

Expression


Co-expression Network