G239515


Basic Information

Item Value
gene id G239515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26055575 ~ 26057001 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU273716
TGGCCATTTTTTATTGTCCTCAGTTCAGTCTTCTGTACATGCACAAAATACTTTAAAGCTATAACAAATGTTCAAGGAATATAACAAATGGATACTTACAgtatcctgacatttaatcatctCAGGAATGAACACAAACTCAAAAATCACAACTTACTTGCAAATTTCAGTGATAAACTATGACGAATTAAAAGCGGCAAAGGGCATCAAACAAAAAATGTAAAGACAAAATAACCTCTTAAAATCAATTTtcaaagataaaataaaaacctAATTTTACAACACCATTGAGGGTATTTATGTAGTCGTCTACTATTCAAGTTAGAAAAAAACACGTAACATTCCCATTAAAACAAACAATTCATAGAGGTTTACAATTAAAGAGTAATTCACATCATAAACAACACATCTAATAGTTATAGGTACTGTATTTGAATGATATAAAAATACAAGATTCCTCTCATTAAAATACCTAAATGTTGCAATCTAATTAAGGTCCGTAGTAATCATAATTACTCTGACATCACCCCGACATGATATGTCACCTCAGAATTAGATGTAAATCTAACTATCATTCCAATGAAAATGTAAGTGTAACGACACACATCAGGAAGTAAGTaccattatgtacaaaacaatcCTTGAAGAAAACAAAATGGCTGGTATAAAAAAGACTGGGAAAAAAAGGCCATCAAAAAGTGGTTTGGGGTGATTAGTGGTGCTGATAATCAAAATGGATGCTGTCCTATTATTTGTATTGCATGTCCCATACCTAGTGGTCTGGGAAGGTTAGTGGTACAGACTAAATTACATCAACAACTCTGCcatataaatactttctgaagattACGTTTCCCATACAAAGCTTGAGTGCATCTTTATCTCAAATGCCTGTACACATTGGATTGGATCATTCTATTAGGAAGAATTTGCACGAGAGGTTTTCTACCTGCGACATTATCAAACCCTCATGAAACTGTATATTGGCACCTCGCTAACATCACTTTCTCTGAGACATGGTTCCTCCTATTCTACAGTAGATGTCTGCCCAAAGGAACTCCGTAAAACCTTTTTGTCGACCTTTAGATCGACGGGCTTCCATTATGGCTGTGTTTTTACTGCCTTACTGATACATCTTCACATGTCCATGCAGTGAGGTGGTGTTGCCCCCACAGTCCACATACTGGTACATCTCCTGGGAGACCTGCTCCGAGTGCCCGAAGTAGGATGTGGTCACAGTCACCCTGAAAACCAGTCAATAGACAGTAGTCAGTTTCCCCAAAATGGCTGCCCACATGGGCGTGTGAGGTTGGACAAAATAAATAAGAGTAGGTACGGTAACATGTGTAAACTCAATGTATTAGTAGAAATATTTGAAAAGGTACAATGCATACAGAAAGtgctc

Function

NR:

description
PREDICTED: transmembrane protein 106B

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU273716 True 1405 lncRNA 0.44 2 26055575 26057001

Neighbor

gene id symbol gene type direction distance location
LOC110515882 LOC106582184 coding downstream 31018 25918915 ~ 26024557 (-)
LOC110515870 LOC106584533 coding downstream 137094 25911707 ~ 25918481 (-)
ica1 LOC106582178 coding downstream 159712 25883818 ~ 25895863 (-)
LOC110515765 LOC106582155 coding downstream 201151 25837637 ~ 25854424 (-)
LOC110515750 LOC106582146 coding downstream 230467 25822812 ~ 25825108 (-)
LOC110515898 LOC106582196 coding upstream 14055 26071056 ~ 26094219 (-)
LOC110515941 etv1 coding upstream 110467 26167468 ~ 26186034 (-)
LOC110515948 LOC106582257 coding upstream 131921 26188922 ~ 26252950 (-)
LOC110515972 LOC106582276 coding upstream 218761 26275762 ~ 26316108 (-)
LOC110515986 meox2 coding upstream 260573 26317574 ~ 26331168 (-)
G239519 NA non-coding downstream 118864 25936223 ~ 25936711 (-)
G239504 NA non-coding downstream 156445 25898818 ~ 25899130 (-)
G239502 NA non-coding downstream 179612 25874811 ~ 25875963 (-)
G239480 pngf non-coding downstream 221335 25832012 ~ 25834240 (-)
G239822 NA non-coding upstream 68882 26125883 ~ 26126134 (-)
G239836 NA non-coding upstream 89219 26146220 ~ 26146503 (-)
G239853 NA non-coding upstream 130002 26187003 ~ 26187203 (-)
G239864 NA non-coding upstream 151683 26208684 ~ 26209104 (-)
G239904 NA non-coding upstream 263314 26320315 ~ 26320540 (-)
LOC110515384 LOC106582009 other downstream 819208 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1089367 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1285252 24767049 ~ 24799511 (-)
G237832 NA other downstream 1534031 24521219 ~ 24521544 (-)
G240409 NA other upstream 512100 26569101 ~ 26569522 (-)
G240464 NA other upstream 617591 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 1014054 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 1055181 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 1098567 27154680 ~ 27159987 (-)

Expression


Co-expression Network