Gene
RNA
| Item | Value |
|---|---|
| gene id | G240383 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 26567694 ~ 26567971 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lysosomal thioesterase PPT2-A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274714 | True | 278 | lncRNA | 0.42 | 1 | 26567694 | 26567971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dhx16 | LOC106582345 | coding | downstream | 64 | 26548090 ~ 26567630 (-) |
| LOC110516135 | LOC106582343 | coding | downstream | 19853 | 26541714 ~ 26547841 (-) |
| mgat1a | LOC106582341 | coding | downstream | 31053 | 26533644 ~ 26536641 (-) |
| LOC110516068 | LOC106582335 | coding | downstream | 34422 | 26524379 ~ 26533272 (-) |
| LOC110503983 | LOC106582320 | coding | downstream | 43634 | 26475098 ~ 26524060 (-) |
| LOC110516190 | fli1 | coding | upstream | 40181 | 26608152 ~ 26621798 (-) |
| LOC110505173 | NA | coding | upstream | 68756 | 26636727 ~ 26637149 (-) |
| LOC110516273 | NA | coding | upstream | 79054 | 26647025 ~ 26649990 (-) |
| LOC110516285 | LOC106582421 | coding | upstream | 123767 | 26691738 ~ 26715464 (-) |
| LOC110505184 | LOC106582443 | coding | upstream | 161103 | 26729074 ~ 26736469 (-) |
| G240403 | NA | non-coding | downstream | 26554 | 26539544 ~ 26541140 (-) |
| G240402 | NA | non-coding | downstream | 28449 | 26538926 ~ 26539245 (-) |
| G240384 | NA | non-coding | downstream | 93651 | 26473769 ~ 26474043 (-) |
| G240371 | NA | non-coding | downstream | 100840 | 26466435 ~ 26466854 (-) |
| G240412 | NA | non-coding | upstream | 5033 | 26573004 ~ 26573783 (-) |
| G240431 | LOC106582366 | non-coding | upstream | 37236 | 26605207 ~ 26605715 (-) |
| G240432 | NA | non-coding | upstream | 37808 | 26605779 ~ 26606214 (-) |
| G240445 | LOC106582385 | non-coding | upstream | 60303 | 26628274 ~ 26630084 (-) |
| G240450 | NA | non-coding | upstream | 70191 | 26638162 ~ 26638375 (-) |
| LOC110515750 | LOC106582146 | other | downstream | 742937 | 25822812 ~ 25825108 (-) |
| LOC110515384 | LOC106582009 | other | downstream | 1331327 | 25171287 ~ 25236536 (-) |
| LOC110515208 | LOC106581894 | other | downstream | 1601486 | 24936516 ~ 25052970 (-) |
| LOC110515154 | LOC106605289 | other | downstream | 1797371 | 24767049 ~ 24799511 (-) |
| G237832 | NA | other | downstream | 2046150 | 24521219 ~ 24521544 (-) |
| G240409 | NA | other | upstream | 1130 | 26569101 ~ 26569522 (-) |
| G240464 | NA | other | upstream | 106621 | 26674592 ~ 26675033 (-) |
| LOC110516631 | LOC106582601 | other | upstream | 503084 | 27070914 ~ 27097259 (-) |
| LOC110516667 | LOC106582624 | other | upstream | 544211 | 27111084 ~ 27127488 (-) |
| LOC110516678 | LOC106605187 | other | upstream | 587597 | 27154680 ~ 27159987 (-) |
