Gene
RNA
| Item | Value |
|---|---|
| gene id | G240412 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 26573004 ~ 26573783 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lysosomal thioesterase PPT2-A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274743 | True | 780 | lncRNA | 0.40 | 1 | 26573004 | 26573783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dhx16 | LOC106582345 | coding | downstream | 5374 | 26548090 ~ 26567630 (-) |
| LOC110516135 | LOC106582343 | coding | downstream | 25163 | 26541714 ~ 26547841 (-) |
| mgat1a | LOC106582341 | coding | downstream | 36363 | 26533644 ~ 26536641 (-) |
| LOC110516068 | LOC106582335 | coding | downstream | 39732 | 26524379 ~ 26533272 (-) |
| LOC110503983 | LOC106582320 | coding | downstream | 48944 | 26475098 ~ 26524060 (-) |
| LOC110516190 | fli1 | coding | upstream | 34369 | 26608152 ~ 26621798 (-) |
| LOC110505173 | NA | coding | upstream | 62944 | 26636727 ~ 26637149 (-) |
| LOC110516273 | NA | coding | upstream | 73242 | 26647025 ~ 26649990 (-) |
| LOC110516285 | LOC106582421 | coding | upstream | 117955 | 26691738 ~ 26715464 (-) |
| LOC110505184 | LOC106582443 | coding | upstream | 155291 | 26729074 ~ 26736469 (-) |
| G240383 | NA | non-coding | downstream | 5033 | 26567694 ~ 26567971 (-) |
| G240403 | NA | non-coding | downstream | 31864 | 26539544 ~ 26541140 (-) |
| G240402 | NA | non-coding | downstream | 33759 | 26538926 ~ 26539245 (-) |
| G240384 | NA | non-coding | downstream | 98961 | 26473769 ~ 26474043 (-) |
| G240431 | LOC106582366 | non-coding | upstream | 31424 | 26605207 ~ 26605715 (-) |
| G240432 | NA | non-coding | upstream | 31996 | 26605779 ~ 26606214 (-) |
| G240445 | LOC106582385 | non-coding | upstream | 54491 | 26628274 ~ 26630084 (-) |
| G240450 | NA | non-coding | upstream | 64379 | 26638162 ~ 26638375 (-) |
| G240438 | NA | non-coding | upstream | 85288 | 26659071 ~ 26659348 (-) |
| G240409 | NA | other | downstream | 3482 | 26569101 ~ 26569522 (-) |
| LOC110515750 | LOC106582146 | other | downstream | 748247 | 25822812 ~ 25825108 (-) |
| LOC110515384 | LOC106582009 | other | downstream | 1336637 | 25171287 ~ 25236536 (-) |
| LOC110515208 | LOC106581894 | other | downstream | 1606796 | 24936516 ~ 25052970 (-) |
| LOC110515154 | LOC106605289 | other | downstream | 1802681 | 24767049 ~ 24799511 (-) |
| G240464 | NA | other | upstream | 100809 | 26674592 ~ 26675033 (-) |
| LOC110516631 | LOC106582601 | other | upstream | 497272 | 27070914 ~ 27097259 (-) |
| LOC110516667 | LOC106582624 | other | upstream | 538399 | 27111084 ~ 27127488 (-) |
| LOC110516678 | LOC106605187 | other | upstream | 581785 | 27154680 ~ 27159987 (-) |
| G240906 | NA | other | upstream | 610877 | 27184660 ~ 27185105 (-) |
