Gene
RNA
| Item | Value |
|---|---|
| gene id | G240432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 26605779 ~ 26606214 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zona pellucida sperm-binding protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274764 | True | 436 | lncRNA | 0.40 | 1 | 26605779 | 26606214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dhx16 | LOC106582345 | coding | downstream | 38149 | 26548090 ~ 26567630 (-) |
| LOC110516135 | LOC106582343 | coding | downstream | 57938 | 26541714 ~ 26547841 (-) |
| mgat1a | LOC106582341 | coding | downstream | 69138 | 26533644 ~ 26536641 (-) |
| LOC110516068 | LOC106582335 | coding | downstream | 72507 | 26524379 ~ 26533272 (-) |
| LOC110503983 | LOC106582320 | coding | downstream | 81719 | 26475098 ~ 26524060 (-) |
| LOC110516190 | fli1 | coding | upstream | 1938 | 26608152 ~ 26621798 (-) |
| LOC110505173 | NA | coding | upstream | 30513 | 26636727 ~ 26637149 (-) |
| LOC110516273 | NA | coding | upstream | 40811 | 26647025 ~ 26649990 (-) |
| LOC110516285 | LOC106582421 | coding | upstream | 85524 | 26691738 ~ 26715464 (-) |
| LOC110505184 | LOC106582443 | coding | upstream | 122860 | 26729074 ~ 26736469 (-) |
| G240431 | LOC106582366 | non-coding | downstream | 64 | 26605207 ~ 26605715 (-) |
| G240412 | NA | non-coding | downstream | 31996 | 26573004 ~ 26573783 (-) |
| G240383 | NA | non-coding | downstream | 37808 | 26567694 ~ 26567971 (-) |
| G240403 | NA | non-coding | downstream | 64639 | 26539544 ~ 26541140 (-) |
| G240402 | NA | non-coding | downstream | 66534 | 26538926 ~ 26539245 (-) |
| G240445 | LOC106582385 | non-coding | upstream | 22060 | 26628274 ~ 26630084 (-) |
| G240450 | NA | non-coding | upstream | 31948 | 26638162 ~ 26638375 (-) |
| G240438 | NA | non-coding | upstream | 52857 | 26659071 ~ 26659348 (-) |
| G240456 | LOC106582397 | non-coding | upstream | 56781 | 26662995 ~ 26664067 (-) |
| G240458 | NA | non-coding | upstream | 60845 | 26667059 ~ 26667329 (-) |
| G240409 | NA | other | downstream | 36257 | 26569101 ~ 26569522 (-) |
| LOC110515750 | LOC106582146 | other | downstream | 781022 | 25822812 ~ 25825108 (-) |
| LOC110515384 | LOC106582009 | other | downstream | 1369412 | 25171287 ~ 25236536 (-) |
| LOC110515208 | LOC106581894 | other | downstream | 1639571 | 24936516 ~ 25052970 (-) |
| LOC110515154 | LOC106605289 | other | downstream | 1835456 | 24767049 ~ 24799511 (-) |
| G240464 | NA | other | upstream | 68378 | 26674592 ~ 26675033 (-) |
| LOC110516631 | LOC106582601 | other | upstream | 464841 | 27070914 ~ 27097259 (-) |
| LOC110516667 | LOC106582624 | other | upstream | 505968 | 27111084 ~ 27127488 (-) |
| LOC110516678 | LOC106605187 | other | upstream | 549354 | 27154680 ~ 27159987 (-) |
| G240906 | NA | other | upstream | 578446 | 27184660 ~ 27185105 (-) |
