G240065 (fli1)


Basic Information

Item Value
gene id G240065
gene name fli1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26611137 ~ 26622407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU274344
CCTTTTTAACGTTAATTATCTAAAAACATGTCAACTCTTTCTTCATATATGCATATGTTGTAGATTAGACCCTACTTTACATAATCtgaggtgtttgtgttgtgccCGCCATTGGTTGAGACagaacatgctcttgaatacagggtgggtgtcaatcatagaaatagaatggacCTATATTTGAATATGAAACAAATCGGAGTTTCAGCGTTTATTGATTTGTTTCAGgtgaaattacatttttattttcaagaaagtataaaatagtttgacaacactgtttgtaagcttttacaTTATAGCAGTCTCAACTGTTTATCtgttccagtgatgaagacataaCTGTCTCGTGGTATGGTGGGGTTTGTAAAATAGGTCAACTATGAGCACCTTTTATCTCTTGAATGTTTTTGCATTTGGGTCCAAAAAGTAACTTAGTGAGAACTTCTACAATGGGCAAATTATGTCTGGAATGTttcattcaaatcaaaagggggACTGtcaaaagtgattgaattcaagtGTATTTACCCAGCAGCCATAGACGGAAGGATTTTTTTCCAAACACAATCATGGTATCAATAATTGCTTCTATTTCACCAGTTGCACGTCCGAGTACTTGGACAGACTAAGTTATAAGGATCATTTAGTTGTAATGTCAGCCTGCGGTACCTCGGAGGGCCTTACTACATGAGAGAGGTCAACACTGACCTAGCCTGCAACGTAATTTCCCAGAGTAGCTCAAACTGCGCATGCAATGTTTTCAAAAATTCCTCCCATGTAGCAAGATGGGGACACACTGAAATGATACTCCCTGATCATCAAATGCACCACTGACCATTCCCATAGAAAACAATGGGGTATCGTCATCGATGGCTTCgtccatattttttttacagtctATGGAAGGAAGCCCAAAAACTGACTTAAAAGAGTGATTTGAGGCAGCCAGAAGAAAACAGAGAGCTGAAGATGGTCCAGTAATCCTTGGGGTGAGTGTCCTTTTGACCGGGCCACCTCTGTTGCCACTAGATTGTCAATTGTGTCCCAAAGTGGGACCCGTACTCGCCCATTTCTCTGCCGGTGCAGCTGTTTCCTGTCTGAAACTGACTTGAGACGTGGACTCGTCAAATAGTTATCAACTCAGGGCAACGCTCCGCCAAAAGACTTTAAAGCGCTCTAAACTATGTAATCTAAAAAGGCAACTCAACACTTAATTTTGAAGTATTTGATCTGCCTCAGAGGTTTGAATAAATTATTCCTGCCACAAAACCCCTCCATTTGAATCCCCTTCTCATTTTAAGGCTGTTTATCTCAATGTTCGCTAGCTCCAGGTTCTTTATGCATGCAGTTTAAGGATTTTACActgtcactgtgttcttggtaatGAGTTGTGAAGTTAATTGTCTTACCTGATTTAACCTGTAGTCTGGGTTGTTGCTGTGTGTTGTTGGTTGGAGTTGTGGGGTAGGAGAAAGTAGGGCTGCTGTCGGAGGTAATTGAGGTGGCCGAGCAGGATGTCAGTGTTGTAGGCGGACGTGAGGCGCATCATATCCTCCTTGGTCATCTTGCAGAGGGCCTTGCCCTCCAGTGTGTGGAAGTGCATGATGTCCACCTCTTCCAGGCTGTACTCCTTGATGGCCCAGTCCAGCCACTGGCGCACATGGTCCTGGGTCCACACCTCAGGGTCTGCGGGCACTAtgactctcttctcctctgtggcGCTGTTGGGCGTGGTGGCGGTCTGGGGGCTGGCGCGGGGCTCAGGGTATGAGGCCTGGTAGGCCAGCTGACCCCCTTCGTTGCTGCTCATGTGTCTGGAGCGTTTGGTCACACTGCAGTCCACAGGGGACTCACGACTGGTTCCGTTGATGTGCTCTCCTCTTTTCCCAGGGTTCTGTGCTCCCGGCCCGGCCCACTCCGGCTCGGTGGGTTCTTGGCTCTCTTCGGAGGCCTGGCTGAAGCTTCCCGGTGACGTCATCTCGCCCTTCATGTGCATGGTCGTGGCGGCAGGGAAGGGCGACTCGAAAATGGACTGGTCCTCGCTCACCACGGACAGTGCTTCCTTTATCGTACAGTCCATTGTAGCAGTCACTCAGTCGTTGATTCTCATTTAGTCATTTAAACACGTTATAACTAGTCTGGATAGCCTGACTGAATCGCATCAACCCATACACAAGCGCATTTACCCTTTGGCGCAAACCATTGCAGCAACAATTCTTGCTTAGTCCATAACCGGATGGcagcttttttctctctctctcactctaaatTGGGAAGTGAAGTCACTCTAACAACGCATTAGGGCTGGGTCCCTACTGGTGAAACGAAGTCCTTTTTAATTTCTTAGAACATTGCACACACAAACCTGTTGATTAGCCTACAAACCAACGATGACAATCTTCCTAATCTGACTGTGCCTAAAAGTTGATCAGGCTGATGATTGGACATAGAGCAATAAAGGTGCAGATATGGTTGGGCTTCTATAGGCATTGCTCCGAGTGTTGTTATCATTCAGAAATGTTTTGAGAAATATGGTGCATTTTGAGGTGCACAAACACATTACATAATGTGTGTTCCAAGCAACATGTAATTTACAAATGAATGTAGGCCTATTTCTAATTTGTTATTGGGCATTGTTGAGATGAATACATTCGCTTGTCATTCAAAAGCCTGTTGCTTGCAACTTTCTAAACTTAAACTTGAATAGCCTCACCATAATAACCATAGTGGTAATGAACATTGTATACCCTTCCTGTAGTTTTTCTAAATATGACTCCGGAAATTGCAACTGATGTCAAAAAATCTCTGACCGCAAACTTGCACACTGTGATAAAAAGAACCTCATTACAAAGTAAGACCATGTTCCCCTTAGCAAACGAATCATTAAACGTTCTCTGACAAATAAC

Function

symbol description
fli1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Acts upstream of or within angiogenesis and positive regulation of DNA-binding transcription factor activity. Predicted to be active in nucleus. Is expressed in several structures, including angioblastic mesenchymal cell; cardiovascular system; hematopoietic system; mesoderm; and pharyngeal arch. Human ortholog(s) of this gene implicated in blood platelet disease and thrombocytopenia. Orthologous to human FLI1 (Fli-1 proto-oncogene, ETS transcription factor).

NR:

description
Friend leukemia integration 1 transcription factor-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274344 True 2909 lncRNA 0.44 5 26611137 26622407

Neighbor

gene id symbol gene type direction distance location
zp3d.2 LOC106582366 coding upstream 3051 26605173 ~ 26608086 (+)
ccdc105 ccdc105 coding upstream 10297 26597478 ~ 26600840 (+)
LOC110516161 LOC106582353 coding upstream 14016 26574152 ~ 26597121 (+)
LOC110516147 ppt2a coding upstream 37437 26567609 ~ 26573700 (+)
tnf tnf coding upstream 138274 26470473 ~ 26472863 (+)
LOC110516250 LOC106605227 coding downstream 254 26622661 ~ 26628082 (+)
LOC110516260 LOC106582385 coding downstream 5833 26628240 ~ 26630086 (+)
LOC110503991 NA coding downstream 11900 26634307 ~ 26636638 (+)
LOC110503999 LOC106582397 coding downstream 32481 26654888 ~ 26690523 (+)
LOC110516307 psmc4 coding downstream 130430 26752837 ~ 26763638 (+)
G240052 NA non-coding upstream 63318 26547238 ~ 26547819 (+)
G240043 LOC106582341 non-coding upstream 76179 26533660 ~ 26534958 (+)
G240010 NA non-coding upstream 123389 26485679 ~ 26487748 (+)
G240009 LOC106605218 non-coding upstream 126317 26479206 ~ 26484820 (+)
G240080 NA non-coding downstream 42043 26664450 ~ 26664817 (+)
G240082 NA non-coding downstream 44404 26666811 ~ 26667027 (+)
G240094 LOC106605233 non-coding downstream 75807 26698214 ~ 26698450 (+)
G240095 NA non-coding downstream 76826 26699233 ~ 26699537 (+)
G240097 NA non-coding downstream 79748 26702155 ~ 26702405 (+)
G239752 meox2 other upstream 282806 26327408 ~ 26328331 (+)
G239697 LOC106582257 other upstream 390954 26213642 ~ 26220183 (+)
G239026 NA other upstream 1069524 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 1411903 25195287 ~ 25199234 (+)
G238050 NA other upstream 1835192 24775279 ~ 24775945 (+)
G240244 NA other downstream 428779 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 634181 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 933765 27556172 ~ 27558532 (+)
LOC110516984 NA other downstream 1092636 27705985 ~ 27723794 (+)
LOC110516993 LOC106605183 other downstream 1124940 27725189 ~ 27749972 (+)

Expression


Co-expression Network