G240458



Basic Information


Item Value
gene id G240458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26667059 ~ 26667329 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU274798
AGTTTATACTGGCTATGGTGtgtcaaaatggacaaacagtactattgcagCCTTTTCTAGTTTTTCCAGCAAGCACCCTCGTTTGGTTTGACGAGTTCCGCTAGgcgccagccgaactgaagcatgctgacgccaTTACTTAAACTGTGTACTAATCGTACCACATACTATATAGAACGTACTGATTTGTGAAAACAAAATGCAGTAAACAACAAATATCAGCATACTAGGCATCCTAcagagaatgtataatctaatggCAATTGCTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU274798 True 271 lncRNA 0.40 1 26667059 26667329

Neighbor


gene id symbol gene type direction distance location
LOC110516273 NA coding downstream 17069 26647025 ~ 26649990 (-)
LOC110505173 NA coding downstream 29910 26636727 ~ 26637149 (-)
LOC110516190 fli1 coding downstream 45261 26608152 ~ 26621798 (-)
dhx16 LOC106582345 coding downstream 99429 26548090 ~ 26567630 (-)
LOC110516135 LOC106582343 coding downstream 119218 26541714 ~ 26547841 (-)
LOC110516285 LOC106582421 coding upstream 24409 26691738 ~ 26715464 (-)
LOC110505184 LOC106582443 coding upstream 61745 26729074 ~ 26736469 (-)
LOC110516341 LOC106582531 coding upstream 145137 26812466 ~ 26817929 (-)
LOC110516351 LOC106605237 coding upstream 163847 26831176 ~ 26881042 (-)
LOC110516494 NA coding upstream 266049 26933378 ~ 26939575 (-)
G240456 LOC106582397 non-coding downstream 2992 26662995 ~ 26664067 (-)
G240438 NA non-coding downstream 7711 26659071 ~ 26659348 (-)
G240450 NA non-coding downstream 28684 26638162 ~ 26638375 (-)
G240445 LOC106582385 non-coding downstream 36975 26628274 ~ 26630084 (-)
G240432 NA non-coding downstream 60845 26605779 ~ 26606214 (-)
G240463 NA non-coding upstream 3299 26670628 ~ 26670901 (-)
G240472 NA non-coding upstream 31952 26699281 ~ 26699605 (-)
G240497 NA non-coding upstream 95384 26762713 ~ 26763620 (-)
G240519 NA non-coding upstream 118096 26785425 ~ 26828419 (-)
G240574 NA non-coding upstream 189740 26857069 ~ 26857277 (-)
G240409 NA other downstream 97537 26569101 ~ 26569522 (-)
LOC110515750 LOC106582146 other downstream 842302 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1430692 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1700851 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1896736 24767049 ~ 24799511 (-)
G240464 NA other upstream 7263 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 403726 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 444853 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 488239 27154680 ~ 27159987 (-)
G240906 NA other upstream 517331 27184660 ~ 27185105 (-)

Expression



Co-expression Network