G240497


Basic Information

Item Value
gene id G240497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26762713 ~ 26763620 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU274842
GAAAACTTCTTTAATATTTTTTAGAGTACTGTTTAATCAGTGAGTACATTACAGGTACAAACTCTCAGCCATTATACAAGCTACAGTCAAGTAAAACATAAAGACACAGTCCATTCACTATGTGTGTGTTAGTCAgtctgaaaccacaaatggacaCAGTAGTAGACAAACACACATAAAATCACAAAATTGTGTGAatgcctttttatttatttttttagagaggggaggggggggggttacttTCTACTTGTAGAACTCATGCTCCTGCTCATCCTTCTTGATAACTGTCTTGTAGGCCTTCTCAAAGTCCTTGGCCAGGACAATGTACCTATTTTCACGGACAGCCAGCATGCCAGCCTCCTGGCAGATAGAGTTGATGTCTGCTCCGGAGATCTTGTCTGGTCTGGCCACATCTACACACTGGTTAAGGACAACCGCAAACACAAATGACACTGAACAATGTAGAGTTCTTTCGGTTACTTAGCAACCAAAGAAAGGTATGGGGAAGTGCATTACTTTACAAAGGCGGGAATCAGTTAGAGTACTTAAGTCATGGTTCATTTGACCTTTCATGAGACTATTGTTCCAGATCAGAGGGGTAATCAAGGAGGTAAATATTTAATGAAAACTTACAAGCACACTCAATGAACTGGACACAGAATTTGTTCTGAGCAGGAAAAGATTGCATGATGTTGCTAGTACAATACA

Function

NR:

description
26S protease regulatory subunit 6B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274842 True 711 lncRNA 0.40 2 26762713 26763620

Neighbor

gene id symbol gene type direction distance location
LOC110505184 LOC106582443 coding downstream 26244 26729074 ~ 26736469 (-)
LOC110516285 LOC106582421 coding downstream 47249 26691738 ~ 26715464 (-)
LOC110516273 NA coding downstream 112723 26647025 ~ 26649990 (-)
LOC110505173 NA coding downstream 125564 26636727 ~ 26637149 (-)
LOC110516190 fli1 coding downstream 140915 26608152 ~ 26621798 (-)
LOC110516341 LOC106582531 coding upstream 48846 26812466 ~ 26817929 (-)
LOC110516351 LOC106605237 coding upstream 67556 26831176 ~ 26881042 (-)
LOC110516494 NA coding upstream 169758 26933378 ~ 26939575 (-)
LOC110516475 NA coding upstream 206778 26928593 ~ 26978577 (-)
LOC110516606 LOC106605168 coding upstream 286372 27049992 ~ 27064472 (-)
G240472 NA non-coding downstream 63108 26699281 ~ 26699605 (-)
G240463 NA non-coding downstream 91812 26670628 ~ 26670901 (-)
G240458 NA non-coding downstream 95384 26667059 ~ 26667329 (-)
G240456 LOC106582397 non-coding downstream 98646 26662995 ~ 26664067 (-)
G240438 NA non-coding downstream 103365 26659071 ~ 26659348 (-)
G240519 NA non-coding upstream 21805 26785425 ~ 26828419 (-)
G240574 NA non-coding upstream 93449 26857069 ~ 26857277 (-)
G240579 NA non-coding upstream 98142 26861762 ~ 26861967 (-)
G240588 NA non-coding upstream 110505 26874125 ~ 26874648 (-)
G240590 NA non-coding upstream 113616 26877236 ~ 26878016 (-)
G240464 NA other downstream 87680 26674592 ~ 26675033 (-)
G240409 NA other downstream 193191 26569101 ~ 26569522 (-)
LOC110515750 LOC106582146 other downstream 937956 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1526346 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1796505 24936516 ~ 25052970 (-)
LOC110516631 LOC106582601 other upstream 307435 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 348562 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 391948 27154680 ~ 27159987 (-)
G240906 NA other upstream 421040 27184660 ~ 27185105 (-)
G242021 LOC106582922 other upstream 1491537 28205275 ~ 28256509 (-)

Expression


Co-expression Network