G240574



Basic Information


Item Value
gene id G240574
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26857069 ~ 26857277 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU274931
attatgttataattaagtctgatttgatagagcagtctgactgagcagcagcaggcccataatcattcattcaaacagcacttttgtgcgttttgccagcaactcttcgcaagcacagcgctgtttatgactttagATTTGCTTGCAGCGctaggggaataactactccaaatctaaaagcgagtgacgtttgaaacagtattagcgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU274931 True 209 lncRNA 0.42 1 26857069 26857277

Neighbor


gene id symbol gene type direction distance location
LOC110516341 LOC106582531 coding downstream 39140 26812466 ~ 26817929 (-)
LOC110505184 LOC106582443 coding downstream 120600 26729074 ~ 26736469 (-)
LOC110516285 LOC106582421 coding downstream 141605 26691738 ~ 26715464 (-)
LOC110516273 NA coding downstream 207079 26647025 ~ 26649990 (-)
LOC110505173 NA coding downstream 219920 26636727 ~ 26637149 (-)
LOC110516494 NA coding upstream 76101 26933378 ~ 26939575 (-)
LOC110516475 NA coding upstream 113121 26928593 ~ 26978577 (-)
LOC110516606 LOC106605168 coding upstream 192715 27049992 ~ 27064472 (-)
LOC110516631 LOC106582601 coding upstream 213637 27070914 ~ 27097259 (-)
LOC110516644 LOC106582613 coding upstream 241263 27098540 ~ 27103054 (-)
G240519 NA non-coding downstream 28650 26785425 ~ 26828419 (-)
G240497 NA non-coding downstream 93449 26762713 ~ 26763620 (-)
G240472 NA non-coding downstream 157464 26699281 ~ 26699605 (-)
G240463 NA non-coding downstream 186168 26670628 ~ 26670901 (-)
G240458 NA non-coding downstream 189740 26667059 ~ 26667329 (-)
G240579 NA non-coding upstream 4485 26861762 ~ 26861967 (-)
G240588 NA non-coding upstream 16848 26874125 ~ 26874648 (-)
G240590 NA non-coding upstream 19959 26877236 ~ 26878016 (-)
G240601 NA non-coding upstream 32599 26889876 ~ 26891172 (-)
G240546 LOC105031101 non-coding upstream 47840 26905117 ~ 26906092 (-)
G240464 NA other downstream 182036 26674592 ~ 26675033 (-)
G240409 NA other downstream 287547 26569101 ~ 26569522 (-)
LOC110515750 LOC106582146 other downstream 1032312 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1620702 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1890861 24936516 ~ 25052970 (-)
LOC110516667 LOC106582624 other upstream 254905 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 298291 27154680 ~ 27159987 (-)
G240906 NA other upstream 327383 27184660 ~ 27185105 (-)
G242021 LOC106582922 other upstream 1397880 28205275 ~ 28256509 (-)

Expression


G240574 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

G240574 Expression in each Bioproject

Bar chart with 17 bars.
G240574 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network