Gene
RNA
| Item | Value |
|---|---|
| gene id | G240242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 27050104 ~ 27050575 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274537 | True | 472 | lncRNA | 0.34 | 1 | 27050104 | 27050575 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-24p1.1 | LOC106582456 | coding | upstream | 1428 | 27016458 ~ 27048676 (+) |
| irgq2 | LOC106582554 | coding | upstream | 35877 | 27012977 ~ 27014227 (+) |
| LOC110516537 | LOC106582465 | coding | upstream | 39023 | 27004845 ~ 27011081 (+) |
| LOC110516512 | LOC106582493 | coding | upstream | 55788 | 26981634 ~ 26994316 (+) |
| LOC118936488 | LOC106582510 | coding | upstream | 101355 | 26938805 ~ 26948749 (+) |
| LOC110505196 | NA | coding | downstream | 133208 | 27183783 ~ 27185128 (+) |
| LOC110516690 | LOC106584585 | coding | downstream | 134807 | 27185382 ~ 27195271 (+) |
| LOC110504003 | LOC106605005 | coding | downstream | 147294 | 27197869 ~ 27200027 (+) |
| LOC110505200 | LOC106581694 | coding | downstream | 153085 | 27203660 ~ 27205290 (+) |
| LOC118944508 | NA | coding | downstream | 188764 | 27239339 ~ 27239905 (+) |
| LOC110516464 | lsr | non-coding | upstream | 159717 | 26866410 ~ 26890388 (+) |
| G240208 | LOC100194703 | non-coding | upstream | 171045 | 26878814 ~ 26879059 (+) |
| G240206 | NA | non-coding | upstream | 173215 | 26876434 ~ 26876889 (+) |
| G240181 | NA | non-coding | upstream | 210927 | 26838250 ~ 26839177 (+) |
| LOC110516329 | LOC106582539 | non-coding | upstream | 264548 | 26769148 ~ 26797346 (+) |
| G240272 | NA | non-coding | downstream | 26290 | 27076865 ~ 27077077 (+) |
| G240304 | NA | non-coding | downstream | 79444 | 27130019 ~ 27132621 (+) |
| G240316 | NA | non-coding | downstream | 91895 | 27142470 ~ 27143522 (+) |
| G240324 | NA | non-coding | downstream | 104111 | 27154686 ~ 27155500 (+) |
| G240329 | NA | non-coding | downstream | 111590 | 27162165 ~ 27162583 (+) |
| G239752 | meox2 | other | upstream | 721773 | 26327408 ~ 26328331 (+) |
| G239697 | LOC106582257 | other | upstream | 829921 | 26213642 ~ 26220183 (+) |
| G239026 | NA | other | upstream | 1508491 | 25540769 ~ 25541613 (+) |
| G238540 | LOC106582009 | other | upstream | 1850870 | 25195287 ~ 25199234 (+) |
| G238050 | NA | other | upstream | 2274159 | 24775279 ~ 24775945 (+) |
| G240244 | NA | other | downstream | 611 | 27051186 ~ 27051954 (+) |
| LOC110516767 | LOC106605158 | other | downstream | 206013 | 27240708 ~ 27264405 (+) |
| G241150 | LOC106582751 | other | downstream | 505597 | 27556172 ~ 27558532 (+) |
| LOC110516984 | NA | other | downstream | 664468 | 27705985 ~ 27723794 (+) |
| LOC110516993 | LOC106605183 | other | downstream | 696772 | 27725189 ~ 27749972 (+) |
