G240343


Basic Information

Item Value
gene id G240343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 27177328 ~ 27177563 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU274672
gggatagggcagtgtgcagagtgagggtgattgcatcgtctgtggatctattggggcaaattgaagtggatctagggtggcaggtaaatTAGacgtgatatgatccttgactctcaaagcacttcatgatgacagaggtgagcgCTACGGGGCGATTGTCattaagttcagttacctttgctttcttgcgTACAGGAAATATTGTGGCCATCTTGAagtatgtggggacagcagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274672 True 236 lncRNA 0.47 1 27177328 27177563

Neighbor

gene id symbol gene type direction distance location
si:dkey-24p1.1 LOC106582456 coding upstream 128652 27016458 ~ 27048676 (+)
irgq2 LOC106582554 coding upstream 163101 27012977 ~ 27014227 (+)
LOC110516537 LOC106582465 coding upstream 166247 27004845 ~ 27011081 (+)
LOC110516512 LOC106582493 coding upstream 183012 26981634 ~ 26994316 (+)
LOC118936488 LOC106582510 coding upstream 228579 26938805 ~ 26948749 (+)
LOC110505196 NA coding downstream 6220 27183783 ~ 27185128 (+)
LOC110516690 LOC106584585 coding downstream 7819 27185382 ~ 27195271 (+)
LOC110504003 LOC106605005 coding downstream 20306 27197869 ~ 27200027 (+)
LOC110505200 LOC106581694 coding downstream 26097 27203660 ~ 27205290 (+)
LOC118944508 NA coding downstream 61776 27239339 ~ 27239905 (+)
G240340 NA non-coding upstream 4098 27172583 ~ 27173230 (+)
G240333 NA non-coding upstream 11966 27165084 ~ 27165362 (+)
G240332 NA non-coding upstream 12340 27164550 ~ 27164988 (+)
G240331 NA non-coding upstream 12856 27163714 ~ 27164472 (+)
G240330 NA non-coding upstream 13800 27163328 ~ 27163528 (+)
G240716 NA non-coding downstream 23573 27201136 ~ 27201473 (+)
G240725 LOC106582654 non-coding downstream 38936 27216499 ~ 27216733 (+)
G240752 NA non-coding downstream 98971 27276534 ~ 27276743 (+)
LOC100135935 LOC106584591 non-coding downstream 99636 27276905 ~ 27278377 (+)
G240244 NA other upstream 125374 27051186 ~ 27051954 (+)
G239752 meox2 other upstream 848997 26327408 ~ 26328331 (+)
G239697 LOC106582257 other upstream 957145 26213642 ~ 26220183 (+)
G239026 NA other upstream 1635715 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 1978094 25195287 ~ 25199234 (+)
LOC110516767 LOC106605158 other downstream 79025 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 378609 27556172 ~ 27558532 (+)
LOC110516984 NA other downstream 537480 27705985 ~ 27723794 (+)
LOC110516993 LOC106605183 other downstream 569784 27725189 ~ 27749972 (+)
LOC110517275 LOC106583018 other downstream 1854148 28995823 ~ 29034924 (+)

Expression


Co-expression Network