Gene
RNA
| Item | Value |
|---|---|
| gene id | G242045 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 28207295 ~ 28208679 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| myomesin-3-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU276534 | True | 768 | lncRNA | 0.48 | 2 | 28207295 | 28208679 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-107n13.1 | LOC106582885 | coding | downstream | 419815 | 27769884 ~ 27787480 (-) |
| ago1 | LOC106582818 | coding | downstream | 524378 | 27659143 ~ 27682917 (-) |
| LOC110516971 | LOC106582842 | coding | downstream | 548437 | 27611085 ~ 27658858 (-) |
| LOC118944661 | NA | coding | downstream | 597695 | 27593069 ~ 27609600 (-) |
| LOC110516872 | LOC106582751 | coding | downstream | 642839 | 27554029 ~ 27564456 (-) |
| LOC110517114 | pnrc2 | coding | upstream | 67088 | 28275767 ~ 28280077 (-) |
| LOC110517198 | LOC106582967 | coding | upstream | 135065 | 28343744 ~ 28353662 (-) |
| LOC110517222 | NA | coding | upstream | 510861 | 28719454 ~ 28725294 (-) |
| LOC110517244 | LOC106582991 | coding | upstream | 572917 | 28781383 ~ 28786278 (-) |
| rspo1 | LOC106605132 | coding | upstream | 682741 | 28891420 ~ 28921524 (-) |
| G242043 | NA | non-coding | downstream | 2453 | 28204634 ~ 28204842 (-) |
| G241970 | NA | non-coding | downstream | 13486 | 28104707 ~ 28193809 (-) |
| G242022 | NA | non-coding | downstream | 27018 | 28175798 ~ 28180277 (-) |
| G241968 | NA | non-coding | downstream | 104276 | 28102143 ~ 28103019 (-) |
| G241964 | NA | non-coding | downstream | 109301 | 28097776 ~ 28097994 (-) |
| G242083 | LOC106605000 | non-coding | upstream | 42321 | 28251000 ~ 28254016 (-) |
| G242078 | NA | non-coding | upstream | 63998 | 28272677 ~ 28297190 (-) |
| G242092 | NA | non-coding | upstream | 88625 | 28297304 ~ 28306937 (-) |
| G242076 | NA | non-coding | upstream | 102176 | 28310855 ~ 28333370 (-) |
| G242121 | NA | non-coding | upstream | 128704 | 28337383 ~ 28340093 (-) |
| G240906 | NA | other | downstream | 1022190 | 27184660 ~ 27185105 (-) |
| LOC110516678 | LOC106605187 | other | downstream | 1048631 | 27154680 ~ 27159987 (-) |
| LOC110516667 | LOC106582624 | other | downstream | 1094673 | 27111084 ~ 27127488 (-) |
| LOC110516631 | LOC106582601 | other | downstream | 1122235 | 27070914 ~ 27097259 (-) |
| G240464 | NA | other | downstream | 1532262 | 26674592 ~ 26675033 (-) |
| G242021 | LOC106582922 | other | upstream | 46478 | 28205275 ~ 28256509 (-) |
| G242539 | LOC106582989 | other | upstream | 518291 | 28726970 ~ 28730375 (-) |
