G242092


Basic Information

Item Value
gene id G242092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 28297304 ~ 28306937 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU276589
aaatacaaataaaaaaagaaagaaactgcattgttggaaaaggacccgtaagtaagcaaaAAACGTTAAAATGTTATTTTGGATTTTATTTTACTTAGACTATCTACAAGACAAAACATCTACATTTGTGTTTGATTGTTTTGTGATCGATCTACTGAAATGACTTGTGAACTGTAGTTGCCATTTGTAGTGTTCTATAGAAAAAAGTGTTCTAGTCTCTGTGTTGTGTAAATCTATCTTTCTGACCTGTGCCCCACTTATCTCAACCAGTGGCGTAGCCAGAAATTTGTTGTTGGGTGGGCCTGCAGAAATTTGTCTGGCCCCCAATTTTATTTGATACAttttgcaatggaacagagacaAATGTGCagtttatagctaatctcatgctattctacacattttggcatgttgctgttttaaagaaaatttcctgcaattctacacattttgccataggatAGAGAGGAACATGTGCAGTTTTTTTTAGctcatctcatgctattctacacattttgccatgaagcTGAGAGAAAATGTAGGATTTTTAAAGCTAACATATAGGTGTGTTGACTGTGATAAAGGCACTGGATTATGAGCTGTCTTGTTTGCTAAATGAACaaatgaaatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU276589 True 705 lncRNA 0.36 2 28297304 28306937

Neighbor

gene id symbol gene type direction distance location
LOC110517114 pnrc2 coding downstream 17227 28275767 ~ 28280077 (-)
si:ch211-107n13.1 LOC106582885 coding downstream 509824 27769884 ~ 27787480 (-)
ago1 LOC106582818 coding downstream 614387 27659143 ~ 27682917 (-)
LOC110516971 LOC106582842 coding downstream 638446 27611085 ~ 27658858 (-)
LOC118944661 NA coding downstream 687704 27593069 ~ 27609600 (-)
LOC110517198 LOC106582967 coding upstream 36807 28343744 ~ 28353662 (-)
LOC110517222 NA coding upstream 412603 28719454 ~ 28725294 (-)
LOC110517244 LOC106582991 coding upstream 474659 28781383 ~ 28786278 (-)
rspo1 LOC106605132 coding upstream 584483 28891420 ~ 28921524 (-)
dnali1 dnali1 coding upstream 727991 29034928 ~ 29039438 (-)
G242078 NA non-coding downstream 114 28272677 ~ 28297190 (-)
G242021 LOC106582922 non-coding downstream 40795 28205275 ~ 28256509 (-)
G242083 LOC106605000 non-coding downstream 43288 28251000 ~ 28254016 (-)
G242045 NA non-coding downstream 88625 28207295 ~ 28208679 (-)
G242043 NA non-coding downstream 92462 28204634 ~ 28204842 (-)
G242076 NA non-coding upstream 3918 28310855 ~ 28333370 (-)
G242121 NA non-coding upstream 30446 28337383 ~ 28340093 (-)
G242126 NA non-coding upstream 62207 28369144 ~ 28369386 (-)
G242127 NA non-coding upstream 64033 28370970 ~ 28371221 (-)
G242129 NA non-coding upstream 65757 28372694 ~ 28372894 (-)
G240906 NA other downstream 1112199 27184660 ~ 27185105 (-)
LOC110516678 LOC106605187 other downstream 1138640 27154680 ~ 27159987 (-)
LOC110516667 LOC106582624 other downstream 1184682 27111084 ~ 27127488 (-)
G242539 LOC106582989 other upstream 420033 28726970 ~ 28730375 (-)
G242796 NA other upstream 638804 28945741 ~ 28946292 (-)
G243154 NA other upstream 825379 29132316 ~ 29152629 (-)

Expression


Co-expression Network