G242576


Basic Information

Item Value
gene id G242576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 28763139 ~ 28763449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU277082
CTaacggacatccagccaatttgacacaaacgtgggaagcattggagtcaacgtgcGCCAGTTTCCCTGTGGAACGGTTGACACCTTGTAGactccatgccccgacaaattgaggctgttctgagggcaaaagggggtgcaactcaatattaggaaggtgttcttaatgttttgtacactcagtgtaaaatCTAGCCGTTTCAATGGCCATTGCACACAGACACTTTGCTTAACACACCCTAAAGGTGTATTTTTCCCCAAAACATGACTGTATAATTAAGTAATAAGGCCAGTATACCACTGCTAAGTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277082 True 311 lncRNA 0.45 1 28763139 28763449

Neighbor

gene id symbol gene type direction distance location
pou3f1 LOC106582989 coding upstream 32740 28726940 ~ 28730399 (+)
LOC110504005 LOC106605136 coding upstream 396403 28352198 ~ 28366736 (+)
LOC110517184 LOC106582959 coding upstream 419678 28341344 ~ 28343461 (+)
rhbdl2 LOC106605138 coding upstream 428259 28322929 ~ 28334880 (+)
akirin1 LOC100499583 coding upstream 441820 28304190 ~ 28321319 (+)
LOC110517255 LOC106605133 coding downstream 35784 28799233 ~ 28841059 (+)
LOC110517275 LOC106583018 coding downstream 232374 28995823 ~ 29034924 (+)
LOC110517283 LOC106583031 coding downstream 276019 29039468 ~ 29045846 (+)
si:ch211-1i11.3 LOC106583027 coding downstream 285148 29048597 ~ 29083292 (+)
map7d1a LOC106583045 coding downstream 341056 29104505 ~ 29184360 (+)
G242556 NA non-coding upstream 20573 28741896 ~ 28742566 (+)
G242453 NA non-coding upstream 42797 28667857 ~ 28720342 (+)
G242412 NA non-coding upstream 151179 28611759 ~ 28611960 (+)
G242405 NA non-coding upstream 154736 28607942 ~ 28608403 (+)
G242366 NA non-coding upstream 158442 28604035 ~ 28604697 (+)
G242578 NA non-coding downstream 504 28763953 ~ 28765227 (+)
G242606 NA non-coding downstream 32022 28795471 ~ 28796167 (+)
G242700 NA non-coding downstream 117975 28881424 ~ 28881637 (+)
G242703 NA non-coding downstream 120526 28883975 ~ 28884181 (+)
G242715 NA non-coding downstream 128155 28891604 ~ 28893051 (+)
LOC110516993 LOC106605183 other upstream 1013413 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 1039345 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 1204607 27556172 ~ 27558532 (+)
LOC110516767 LOC106605158 other upstream 1498746 27240708 ~ 27264405 (+)
G240244 NA other upstream 1711185 27051186 ~ 27051954 (+)
G243679 LOC107756720 other downstream 904930 29668379 ~ 29690796 (+)
G244292 LOC106583212 other downstream 1368950 30132399 ~ 30137564 (+)
G244691 NA other downstream 1868321 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 2102117 30865566 ~ 30874608 (+)

Expression


Co-expression Network