G242700


Basic Information

Item Value
gene id G242700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 28881424 ~ 28881637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU277212
ATATGACACAAGTGTCCATTTTtcgtccttaaatgaaactggtatacgtTTTTATCATAATTTTCTTTAGCCAATGTTGGTCTTTCTCCCCCTTTCACGTTCCTTttccatttttgcggtaatgctgcaattagttggttgtaattttgagtagagcagacatttccatatatttttgttagttACATGTGTGACacctccaccagtcctattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277212 True 214 lncRNA 0.36 1 28881424 28881637

Neighbor

gene id symbol gene type direction distance location
LOC110517255 LOC106605133 coding upstream 40365 28799233 ~ 28841059 (+)
pou3f1 LOC106582989 coding upstream 151025 28726940 ~ 28730399 (+)
LOC110504005 LOC106605136 coding upstream 514688 28352198 ~ 28366736 (+)
LOC110517184 LOC106582959 coding upstream 537963 28341344 ~ 28343461 (+)
rhbdl2 LOC106605138 coding upstream 546544 28322929 ~ 28334880 (+)
LOC110517275 LOC106583018 coding downstream 114186 28995823 ~ 29034924 (+)
LOC110517283 LOC106583031 coding downstream 157831 29039468 ~ 29045846 (+)
si:ch211-1i11.3 LOC106583027 coding downstream 166960 29048597 ~ 29083292 (+)
map7d1a LOC106583045 coding downstream 222868 29104505 ~ 29184360 (+)
thrap3a LOC106583094 coding downstream 374698 29256335 ~ 29286477 (+)
G242606 NA non-coding upstream 85257 28795471 ~ 28796167 (+)
G242578 NA non-coding upstream 116197 28763953 ~ 28765227 (+)
G242576 NA non-coding upstream 117975 28763139 ~ 28763449 (+)
G242556 NA non-coding upstream 138858 28741896 ~ 28742566 (+)
G242453 NA non-coding upstream 161082 28667857 ~ 28720342 (+)
G242703 NA non-coding downstream 2338 28883975 ~ 28884181 (+)
G242715 NA non-coding downstream 9967 28891604 ~ 28893051 (+)
G242731 NA non-coding downstream 32095 28913732 ~ 28914028 (+)
G242761 NA non-coding downstream 42905 28924542 ~ 28924848 (+)
G242763 NA non-coding downstream 43356 28924993 ~ 28925212 (+)
LOC110516993 LOC106605183 other upstream 1131698 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 1157630 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 1322892 27556172 ~ 27558532 (+)
LOC110516767 LOC106605158 other upstream 1617031 27240708 ~ 27264405 (+)
G240244 NA other upstream 1829470 27051186 ~ 27051954 (+)
G243679 LOC107756720 other downstream 786742 29668379 ~ 29690796 (+)
G244292 LOC106583212 other downstream 1250762 30132399 ~ 30137564 (+)
G244691 NA other downstream 1750133 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 1983929 30865566 ~ 30874608 (+)

Expression


Co-expression Network