Item | Value |
---|---|
gene id | G242782 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 28938063 ~ 28938407 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU277295 | True | 345 | lncRNA | 0.37 | 1 | 28938063 | 28938407 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110517255 | LOC106605133 | coding | upstream | 97004 | 28799233 ~ 28841059 (+) |
pou3f1 | LOC106582989 | coding | upstream | 207664 | 28726940 ~ 28730399 (+) |
LOC110504005 | LOC106605136 | coding | upstream | 571327 | 28352198 ~ 28366736 (+) |
LOC110517184 | LOC106582959 | coding | upstream | 594602 | 28341344 ~ 28343461 (+) |
rhbdl2 | LOC106605138 | coding | upstream | 603183 | 28322929 ~ 28334880 (+) |
LOC110517275 | LOC106583018 | coding | downstream | 57416 | 28995823 ~ 29034924 (+) |
LOC110517283 | LOC106583031 | coding | downstream | 101061 | 29039468 ~ 29045846 (+) |
si:ch211-1i11.3 | LOC106583027 | coding | downstream | 110190 | 29048597 ~ 29083292 (+) |
map7d1a | LOC106583045 | coding | downstream | 166098 | 29104505 ~ 29184360 (+) |
thrap3a | LOC106583094 | coding | downstream | 317928 | 29256335 ~ 29286477 (+) |
G242763 | NA | non-coding | upstream | 12851 | 28924993 ~ 28925212 (+) |
G242761 | NA | non-coding | upstream | 13215 | 28924542 ~ 28924848 (+) |
G242731 | NA | non-coding | upstream | 24035 | 28913732 ~ 28914028 (+) |
G242715 | NA | non-coding | upstream | 45012 | 28891604 ~ 28893051 (+) |
G242703 | NA | non-coding | upstream | 53882 | 28883975 ~ 28884181 (+) |
G242828 | NA | non-coding | downstream | 29586 | 28967993 ~ 28968242 (+) |
G242831 | NA | non-coding | downstream | 30679 | 28969086 ~ 28969306 (+) |
G242882 | NA | non-coding | downstream | 98825 | 29037232 ~ 29038516 (+) |
G242898 | NA | non-coding | downstream | 254319 | 29192726 ~ 29193219 (+) |
G242890 | NA | non-coding | downstream | 256072 | 29194479 ~ 29195260 (+) |
LOC110516993 | LOC106605183 | other | upstream | 1188337 | 27725189 ~ 27749972 (+) |
LOC110516984 | NA | other | upstream | 1214269 | 27705985 ~ 27723794 (+) |
G241150 | LOC106582751 | other | upstream | 1379531 | 27556172 ~ 27558532 (+) |
LOC110516767 | LOC106605158 | other | upstream | 1673670 | 27240708 ~ 27264405 (+) |
G240244 | NA | other | upstream | 1886109 | 27051186 ~ 27051954 (+) |
G243679 | LOC107756720 | other | downstream | 729972 | 29668379 ~ 29690796 (+) |
G244292 | LOC106583212 | other | downstream | 1193992 | 30132399 ~ 30137564 (+) |
G244691 | NA | other | downstream | 1693363 | 30631770 ~ 30632533 (+) |
G244851 | cep85 | other | downstream | 1927159 | 30865566 ~ 30874608 (+) |