Gene
RNA
| Item | Value |
|---|---|
| gene id | G242828 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 28967993 ~ 28968242 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277341 | True | 250 | lncRNA | 0.34 | 1 | 28967993 | 28968242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517255 | LOC106605133 | coding | upstream | 126934 | 28799233 ~ 28841059 (+) |
| pou3f1 | LOC106582989 | coding | upstream | 237594 | 28726940 ~ 28730399 (+) |
| LOC110504005 | LOC106605136 | coding | upstream | 601257 | 28352198 ~ 28366736 (+) |
| LOC110517184 | LOC106582959 | coding | upstream | 624532 | 28341344 ~ 28343461 (+) |
| rhbdl2 | LOC106605138 | coding | upstream | 633113 | 28322929 ~ 28334880 (+) |
| LOC110517275 | LOC106583018 | coding | downstream | 27581 | 28995823 ~ 29034924 (+) |
| LOC110517283 | LOC106583031 | coding | downstream | 71226 | 29039468 ~ 29045846 (+) |
| si:ch211-1i11.3 | LOC106583027 | coding | downstream | 80355 | 29048597 ~ 29083292 (+) |
| map7d1a | LOC106583045 | coding | downstream | 136263 | 29104505 ~ 29184360 (+) |
| thrap3a | LOC106583094 | coding | downstream | 288093 | 29256335 ~ 29286477 (+) |
| G242782 | NA | non-coding | upstream | 29586 | 28938063 ~ 28938407 (+) |
| G242763 | NA | non-coding | upstream | 42781 | 28924993 ~ 28925212 (+) |
| G242761 | NA | non-coding | upstream | 43145 | 28924542 ~ 28924848 (+) |
| G242731 | NA | non-coding | upstream | 53965 | 28913732 ~ 28914028 (+) |
| G242715 | NA | non-coding | upstream | 74942 | 28891604 ~ 28893051 (+) |
| G242831 | NA | non-coding | downstream | 844 | 28969086 ~ 28969306 (+) |
| G242882 | NA | non-coding | downstream | 68990 | 29037232 ~ 29038516 (+) |
| G242898 | NA | non-coding | downstream | 224484 | 29192726 ~ 29193219 (+) |
| G242890 | NA | non-coding | downstream | 226237 | 29194479 ~ 29195260 (+) |
| G242969 | NA | non-coding | downstream | 275365 | 29243607 ~ 29243843 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 1218267 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 1244199 | 27705985 ~ 27723794 (+) |
| G241150 | LOC106582751 | other | upstream | 1409461 | 27556172 ~ 27558532 (+) |
| LOC110516767 | LOC106605158 | other | upstream | 1703600 | 27240708 ~ 27264405 (+) |
| G240244 | NA | other | upstream | 1916039 | 27051186 ~ 27051954 (+) |
| G243679 | LOC107756720 | other | downstream | 700137 | 29668379 ~ 29690796 (+) |
| G244292 | LOC106583212 | other | downstream | 1164157 | 30132399 ~ 30137564 (+) |
| G244691 | NA | other | downstream | 1663528 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 1897324 | 30865566 ~ 30874608 (+) |
