Gene
RNA
| Item | Value |
|---|---|
| gene id | G242882 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 29037232 ~ 29038516 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: axonemal dynein light intermediate polypeptide 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277396 | True | 757 | lncRNA | 0.51 | 2 | 29037232 | 29038516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517275 | LOC106583018 | coding | upstream | 2308 | 28995823 ~ 29034924 (+) |
| LOC110517255 | LOC106605133 | coding | upstream | 196173 | 28799233 ~ 28841059 (+) |
| pou3f1 | LOC106582989 | coding | upstream | 306833 | 28726940 ~ 28730399 (+) |
| LOC110504005 | LOC106605136 | coding | upstream | 670496 | 28352198 ~ 28366736 (+) |
| LOC110517184 | LOC106582959 | coding | upstream | 693771 | 28341344 ~ 28343461 (+) |
| LOC110517283 | LOC106583031 | coding | downstream | 952 | 29039468 ~ 29045846 (+) |
| si:ch211-1i11.3 | LOC106583027 | coding | downstream | 10081 | 29048597 ~ 29083292 (+) |
| map7d1a | LOC106583045 | coding | downstream | 65989 | 29104505 ~ 29184360 (+) |
| thrap3a | LOC106583094 | coding | downstream | 217819 | 29256335 ~ 29286477 (+) |
| LOC110517404 | LOC106605124 | coding | downstream | 252404 | 29290920 ~ 29312030 (+) |
| G242831 | NA | non-coding | upstream | 67926 | 28969086 ~ 28969306 (+) |
| G242828 | NA | non-coding | upstream | 68990 | 28967993 ~ 28968242 (+) |
| G242782 | NA | non-coding | upstream | 98825 | 28938063 ~ 28938407 (+) |
| G242763 | NA | non-coding | upstream | 112020 | 28924993 ~ 28925212 (+) |
| G242761 | NA | non-coding | upstream | 112384 | 28924542 ~ 28924848 (+) |
| G242898 | NA | non-coding | downstream | 154210 | 29192726 ~ 29193219 (+) |
| G242890 | NA | non-coding | downstream | 155963 | 29194479 ~ 29195260 (+) |
| G242969 | NA | non-coding | downstream | 205091 | 29243607 ~ 29243843 (+) |
| G242972 | NA | non-coding | downstream | 206594 | 29245110 ~ 29245393 (+) |
| G242974 | NA | non-coding | downstream | 207645 | 29246161 ~ 29246363 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 1287506 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 1313438 | 27705985 ~ 27723794 (+) |
| G241150 | LOC106582751 | other | upstream | 1478700 | 27556172 ~ 27558532 (+) |
| LOC110516767 | LOC106605158 | other | upstream | 1772839 | 27240708 ~ 27264405 (+) |
| G243679 | LOC107756720 | other | downstream | 629863 | 29668379 ~ 29690796 (+) |
| G244292 | LOC106583212 | other | downstream | 1093883 | 30132399 ~ 30137564 (+) |
| G244691 | NA | other | downstream | 1593254 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 1827050 | 30865566 ~ 30874608 (+) |
| LOC110518244 | LOC106583484 | other | downstream | 1879515 | 30918022 ~ 30924289 (+) |
