G242898


Basic Information

Item Value
gene id G242898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 29192726 ~ 29193219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU277419
ATCTAAATATATTGATTCGTACACttttggaattctctcaaccagcttcacatggaatgcttttccaacaatcttgaaggagttcacacatatgctgagcacttgttgtctgcttttccttcaccctgcggtccaactcatcccaaaccatctcaattgggttgaggtatgTTACATCTGCCCCTGCCACGCCCTCTACTTCTTATCCTGTGTCTCCCTAACCTTCTGCCACTCCCCCATTGCTCTCTCCAttcatctctctgtgtgggtgtatctgattgtgtgagtggagacaggtgtgctggagtcagagcagatccccaccagctgcaacctgttccataatcaagacctctacaaatactcagccctgccacttccacagTGCCAGATTGTAGTCTCTGCTCATTCCgtccgctctgactctggtccctgttgTCAGTCCCTCGTCTCGTCAGTCCTGCTTCCCTGGACCCCCGCCCTACTGCTTCCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277419 True 494 lncRNA 0.50 1 29192726 29193219

Neighbor

gene id symbol gene type direction distance location
map7d1a LOC106583045 coding upstream 8366 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 109434 29048597 ~ 29083292 (+)
LOC110517283 LOC106583031 coding upstream 146880 29039468 ~ 29045846 (+)
LOC110517275 LOC106583018 coding upstream 157802 28995823 ~ 29034924 (+)
LOC110517255 LOC106605133 coding upstream 351667 28799233 ~ 28841059 (+)
thrap3a LOC106583094 coding downstream 63116 29256335 ~ 29286477 (+)
LOC110517404 LOC106605124 coding downstream 97701 29290920 ~ 29312030 (+)
LOC110517541 LOC106583205 coding downstream 901957 30095176 ~ 30122574 (+)
LOC110517569 LOC106583231 coding downstream 949304 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 977540 30170759 ~ 30196394 (+)
G242882 NA non-coding upstream 154210 29037232 ~ 29038516 (+)
G242831 NA non-coding upstream 223420 28969086 ~ 28969306 (+)
G242828 NA non-coding upstream 224484 28967993 ~ 28968242 (+)
G242782 NA non-coding upstream 254319 28938063 ~ 28938407 (+)
G242763 NA non-coding upstream 267514 28924993 ~ 28925212 (+)
G242890 NA non-coding downstream 1260 29194479 ~ 29195260 (+)
G242969 NA non-coding downstream 50388 29243607 ~ 29243843 (+)
G242972 NA non-coding downstream 51891 29245110 ~ 29245393 (+)
G242974 NA non-coding downstream 52942 29246161 ~ 29246363 (+)
G242893 NA non-coding downstream 94559 29287778 ~ 29288682 (+)
LOC110516993 LOC106605183 other upstream 1443000 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 1468932 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 1634194 27556172 ~ 27558532 (+)
LOC110516767 LOC106605158 other upstream 1928333 27240708 ~ 27264405 (+)
G243679 LOC107756720 other downstream 475160 29668379 ~ 29690796 (+)
G244292 LOC106583212 other downstream 939180 30132399 ~ 30137564 (+)
G244691 NA other downstream 1438551 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 1672347 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 1724812 30918022 ~ 30924289 (+)

Expression


Co-expression Network