Gene
RNA
| Item | Value |
|---|---|
| gene id | G242890 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 29194479 ~ 29195260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277411 | True | 782 | lncRNA | 0.35 | 1 | 29194479 | 29195260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| map7d1a | LOC106583045 | coding | upstream | 10119 | 29104505 ~ 29184360 (+) |
| si:ch211-1i11.3 | LOC106583027 | coding | upstream | 111187 | 29048597 ~ 29083292 (+) |
| LOC110517283 | LOC106583031 | coding | upstream | 148633 | 29039468 ~ 29045846 (+) |
| LOC110517275 | LOC106583018 | coding | upstream | 159555 | 28995823 ~ 29034924 (+) |
| LOC110517255 | LOC106605133 | coding | upstream | 353420 | 28799233 ~ 28841059 (+) |
| thrap3a | LOC106583094 | coding | downstream | 61075 | 29256335 ~ 29286477 (+) |
| LOC110517404 | LOC106605124 | coding | downstream | 95660 | 29290920 ~ 29312030 (+) |
| LOC110517541 | LOC106583205 | coding | downstream | 899916 | 30095176 ~ 30122574 (+) |
| LOC110517569 | LOC106583231 | coding | downstream | 947263 | 30142523 ~ 30165671 (+) |
| LOC110517587 | LOC106583242 | coding | downstream | 975499 | 30170759 ~ 30196394 (+) |
| G242898 | NA | non-coding | upstream | 1260 | 29192726 ~ 29193219 (+) |
| G242882 | NA | non-coding | upstream | 155963 | 29037232 ~ 29038516 (+) |
| G242831 | NA | non-coding | upstream | 225173 | 28969086 ~ 28969306 (+) |
| G242828 | NA | non-coding | upstream | 226237 | 28967993 ~ 28968242 (+) |
| G242782 | NA | non-coding | upstream | 256072 | 28938063 ~ 28938407 (+) |
| G242969 | NA | non-coding | downstream | 48347 | 29243607 ~ 29243843 (+) |
| G242972 | NA | non-coding | downstream | 49850 | 29245110 ~ 29245393 (+) |
| G242974 | NA | non-coding | downstream | 50901 | 29246161 ~ 29246363 (+) |
| G242893 | NA | non-coding | downstream | 92518 | 29287778 ~ 29288682 (+) |
| G242981 | NA | non-coding | downstream | 94213 | 29289473 ~ 29289704 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 1444753 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 1470685 | 27705985 ~ 27723794 (+) |
| G241150 | LOC106582751 | other | upstream | 1635947 | 27556172 ~ 27558532 (+) |
| LOC110516767 | LOC106605158 | other | upstream | 1930086 | 27240708 ~ 27264405 (+) |
| G243679 | LOC107756720 | other | downstream | 473119 | 29668379 ~ 29690796 (+) |
| G244292 | LOC106583212 | other | downstream | 937139 | 30132399 ~ 30137564 (+) |
| G244691 | NA | other | downstream | 1436510 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 1670306 | 30865566 ~ 30874608 (+) |
| LOC110518244 | LOC106583484 | other | downstream | 1722771 | 30918022 ~ 30924289 (+) |
