G243328


Basic Information

Item Value
gene id G243328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 29390459 ~ 29390703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU277876
gggtcattgtcgatttggtagacccatttgtgaccaagctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacataattttcctgcctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgctgccaccccgtgcttcacagttgggatggtgttcttcagcttgcaagcctccccctttttccaccaaacataatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277876 True 245 lncRNA 0.47 1 29390459 29390703

Neighbor

gene id symbol gene type direction distance location
LOC110517404 LOC106605124 coding upstream 78429 29290920 ~ 29312030 (+)
thrap3a LOC106583094 coding upstream 103982 29256335 ~ 29286477 (+)
map7d1a LOC106583045 coding upstream 206099 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 307167 29048597 ~ 29083292 (+)
LOC110517283 LOC106583031 coding upstream 344613 29039468 ~ 29045846 (+)
LOC110517541 LOC106583205 coding downstream 704473 30095176 ~ 30122574 (+)
LOC110517569 LOC106583231 coding downstream 751820 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 780056 30170759 ~ 30196394 (+)
LOC110517613 LOC106583245 coding downstream 805892 30196595 ~ 30217693 (+)
LOC110517635 LOC106583263 coding downstream 827617 30218320 ~ 30220984 (+)
G242981 NA non-coding upstream 100755 29289473 ~ 29289704 (+)
G242893 NA non-coding upstream 101777 29287778 ~ 29288682 (+)
G242974 NA non-coding upstream 144096 29246161 ~ 29246363 (+)
G242972 NA non-coding upstream 145066 29245110 ~ 29245393 (+)
G242969 NA non-coding upstream 146616 29243607 ~ 29243843 (+)
G243344 NA non-coding downstream 55130 29445833 ~ 29508364 (+)
G243343 NA non-coding downstream 56106 29446809 ~ 29448579 (+)
G243381 LOC106583175 non-coding downstream 70474 29461177 ~ 29462986 (+)
G243342 NA non-coding downstream 85394 29476097 ~ 29487514 (+)
G243419 NA non-coding downstream 143553 29534256 ~ 29541255 (+)
LOC110517275 LOC106583018 other upstream 355745 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 1640733 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 1666665 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 1831927 27556172 ~ 27558532 (+)
LOC110516767 LOC106605158 other upstream 2126066 27240708 ~ 27264405 (+)
G243679 LOC107756720 other downstream 277676 29668379 ~ 29690796 (+)
G244292 LOC106583212 other downstream 741696 30132399 ~ 30137564 (+)
G244691 NA other downstream 1241067 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 1474863 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 1527328 30918022 ~ 30924289 (+)

Expression


Co-expression Network