G243679 (LOC107756720)


Basic Information

Item Value
gene id G243679
gene name LOC107756720
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 29668379 ~ 29690796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278253
gattgtagtattgatctccttccgggaaccactcccccccggggtagactatactctctgtcggctcccgaacgtaaggctctcgaagattatttgtctgtagctcttgccgccggtaccatagtcccctcctcctctcccgccggagcggggttttttttttgttaagaagaaggacgggtccctgcgcccctgcatggattatcgagggctgaatgacataacagtgaagaatcgttatccgcttcctcttatgtcttcagccttcgagatcctgcagggagccaggtttttcactaagttggaccttcgtaacgcttaccatctcgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagggcactttgaataccgggttcttcctttcggcctcgctaacgctccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcgtttaccttgacgatatcctgattttttcaccgtcactccagattcatgttcagcacgttcgacgtgtcctccagcgc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278253 True 565 TUCP 0.52 2 29668379 29690796

Neighbor

gene id symbol gene type direction distance location
LOC110517404 LOC106605124 coding upstream 356349 29290920 ~ 29312030 (+)
thrap3a LOC106583094 coding upstream 381902 29256335 ~ 29286477 (+)
map7d1a LOC106583045 coding upstream 484019 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 585087 29048597 ~ 29083292 (+)
LOC110517283 LOC106583031 coding upstream 622533 29039468 ~ 29045846 (+)
LOC110517541 LOC106583205 coding downstream 404380 30095176 ~ 30122574 (+)
LOC110517569 LOC106583231 coding downstream 451727 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 479963 30170759 ~ 30196394 (+)
LOC110517613 LOC106583245 coding downstream 505799 30196595 ~ 30217693 (+)
LOC110517635 LOC106583263 coding downstream 527524 30218320 ~ 30220984 (+)
G243419 NA non-coding upstream 127124 29534256 ~ 29541255 (+)
G243344 NA non-coding upstream 160015 29445833 ~ 29508364 (+)
G243342 NA non-coding upstream 180865 29476097 ~ 29487514 (+)
G243381 LOC106583175 non-coding upstream 205393 29461177 ~ 29462986 (+)
G243343 NA non-coding upstream 219800 29446809 ~ 29448579 (+)
G243715 NA non-coding downstream 4798 29695594 ~ 29696181 (+)
G243731 NA non-coding downstream 16778 29707574 ~ 29707781 (+)
G243767 NA non-coding downstream 44179 29734975 ~ 29735183 (+)
G244083 NA non-coding downstream 275946 29966742 ~ 29966941 (+)
G244107 NA non-coding downstream 294194 29984990 ~ 29985219 (+)
LOC110517275 LOC106583018 other upstream 633665 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 1918653 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 1944585 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 2109847 27556172 ~ 27558532 (+)
LOC110516767 LOC106605158 other upstream 2403986 27240708 ~ 27264405 (+)
G244292 LOC106583212 other downstream 441603 30132399 ~ 30137564 (+)
G244691 NA other downstream 940974 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 1174770 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 1227235 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 1253942 30939321 ~ 31127608 (+)

Expression


Co-expression Network