Gene
RNA
| Item | Value |
|---|---|
| gene id | G243731 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 29707574 ~ 29707781 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109904493 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278307 | True | 208 | lncRNA | 0.49 | 1 | 29707574 | 29707781 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517404 | LOC106605124 | coding | upstream | 395544 | 29290920 ~ 29312030 (+) |
| thrap3a | LOC106583094 | coding | upstream | 421097 | 29256335 ~ 29286477 (+) |
| map7d1a | LOC106583045 | coding | upstream | 523214 | 29104505 ~ 29184360 (+) |
| si:ch211-1i11.3 | LOC106583027 | coding | upstream | 624282 | 29048597 ~ 29083292 (+) |
| LOC110517283 | LOC106583031 | coding | upstream | 661728 | 29039468 ~ 29045846 (+) |
| LOC110517541 | LOC106583205 | coding | downstream | 387395 | 30095176 ~ 30122574 (+) |
| LOC110517569 | LOC106583231 | coding | downstream | 434742 | 30142523 ~ 30165671 (+) |
| LOC110517587 | LOC106583242 | coding | downstream | 462978 | 30170759 ~ 30196394 (+) |
| LOC110517613 | LOC106583245 | coding | downstream | 488814 | 30196595 ~ 30217693 (+) |
| LOC110517635 | LOC106583263 | coding | downstream | 510539 | 30218320 ~ 30220984 (+) |
| G243715 | NA | non-coding | upstream | 11393 | 29695594 ~ 29696181 (+) |
| G243419 | NA | non-coding | upstream | 166319 | 29534256 ~ 29541255 (+) |
| G243344 | NA | non-coding | upstream | 199210 | 29445833 ~ 29508364 (+) |
| G243767 | NA | non-coding | downstream | 27194 | 29734975 ~ 29735183 (+) |
| G244083 | NA | non-coding | downstream | 258961 | 29966742 ~ 29966941 (+) |
| G244107 | NA | non-coding | downstream | 277209 | 29984990 ~ 29985219 (+) |
| G244112 | NA | non-coding | downstream | 279356 | 29987137 ~ 29987862 (+) |
| G244207 | NA | non-coding | downstream | 343790 | 30051571 ~ 30051830 (+) |
| G243679 | LOC107756720 | other | upstream | 16778 | 29668379 ~ 29690796 (+) |
| LOC110517275 | LOC106583018 | other | upstream | 672860 | 28995823 ~ 29034924 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 1957848 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 1983780 | 27705985 ~ 27723794 (+) |
| G241150 | LOC106582751 | other | upstream | 2149042 | 27556172 ~ 27558532 (+) |
| G244292 | LOC106583212 | other | downstream | 424618 | 30132399 ~ 30137564 (+) |
| G244691 | NA | other | downstream | 923989 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 1157785 | 30865566 ~ 30874608 (+) |
| LOC110518244 | LOC106583484 | other | downstream | 1210250 | 30918022 ~ 30924289 (+) |
| LOC110518266 | LOC106583495 | other | downstream | 1236957 | 30939321 ~ 31127608 (+) |
