G244207


Basic Information

Item Value
gene id G244207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30051571 ~ 30051830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278801
aacatagcatggcagcaacacatgacaacacagcatggtagcaacataacatcacaacgacatggtagcaacacaacatggcagcagcacaacatggtagcaacacaaaacagggtacaaacattattgggcacagacaacaaagggcaagaaggtagagacaacaatacatcacgcaacgcagccacaactgtcagtaagagtgtccatgattgagtctttgaatgaagagattgagataaaactgtccagtttgagtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278801 True 260 lncRNA 0.43 1 30051571 30051830

Neighbor

gene id symbol gene type direction distance location
LOC110517404 LOC106605124 coding upstream 739541 29290920 ~ 29312030 (+)
thrap3a LOC106583094 coding upstream 765094 29256335 ~ 29286477 (+)
map7d1a LOC106583045 coding upstream 867211 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 968279 29048597 ~ 29083292 (+)
LOC110517283 LOC106583031 coding upstream 1005725 29039468 ~ 29045846 (+)
LOC110517541 LOC106583205 coding downstream 43346 30095176 ~ 30122574 (+)
LOC110517569 LOC106583231 coding downstream 90693 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 118929 30170759 ~ 30196394 (+)
LOC110517613 LOC106583245 coding downstream 144765 30196595 ~ 30217693 (+)
LOC110517635 LOC106583263 coding downstream 166490 30218320 ~ 30220984 (+)
G244112 NA non-coding upstream 63709 29987137 ~ 29987862 (+)
G244107 NA non-coding upstream 66352 29984990 ~ 29985219 (+)
G244083 NA non-coding upstream 84630 29966742 ~ 29966941 (+)
G243767 NA non-coding upstream 316388 29734975 ~ 29735183 (+)
G243731 NA non-coding upstream 343790 29707574 ~ 29707781 (+)
G244216 NA non-coding downstream 5618 30057448 ~ 30058005 (+)
G244218 NA non-coding downstream 6589 30058419 ~ 30058626 (+)
G244220 NA non-coding downstream 7608 30059438 ~ 30059653 (+)
G244231 NA non-coding downstream 14413 30066243 ~ 30066454 (+)
G244239 NA non-coding downstream 21045 30072875 ~ 30073119 (+)
G243679 LOC107756720 other upstream 360775 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1016857 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 2301845 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 2327777 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 2493039 27556172 ~ 27558532 (+)
G244292 LOC106583212 other downstream 80569 30132399 ~ 30137564 (+)
G244691 NA other downstream 579940 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 813736 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 866201 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 892908 30939321 ~ 31127608 (+)

Expression


Co-expression Network