G244218


Basic Information

Item Value
gene id G244218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30058419 ~ 30058626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278815
ctcacctggggtgatcgagcagtgctccgcctgtcctcccgactcccagacgagttcctccagcaccggtcggacgtgtgccctcgtcgaccacaactggtgcaggaggacactcctcctccggtccccctcgaAGCCGCCCCTCCTAATTCCATAGGGATAGgggcaggagggctgggaagtggaaacgacagggcctgatccgaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278815 True 208 lncRNA 0.64 1 30058419 30058626

Neighbor

gene id symbol gene type direction distance location
LOC110517404 LOC106605124 coding upstream 746389 29290920 ~ 29312030 (+)
thrap3a LOC106583094 coding upstream 771942 29256335 ~ 29286477 (+)
map7d1a LOC106583045 coding upstream 874059 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 975127 29048597 ~ 29083292 (+)
LOC110517283 LOC106583031 coding upstream 1012573 29039468 ~ 29045846 (+)
LOC110517541 LOC106583205 coding downstream 36550 30095176 ~ 30122574 (+)
LOC110517569 LOC106583231 coding downstream 83897 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 112133 30170759 ~ 30196394 (+)
LOC110517613 LOC106583245 coding downstream 137969 30196595 ~ 30217693 (+)
LOC110517635 LOC106583263 coding downstream 159694 30218320 ~ 30220984 (+)
G244216 NA non-coding upstream 414 30057448 ~ 30058005 (+)
G244207 NA non-coding upstream 6589 30051571 ~ 30051830 (+)
G244112 NA non-coding upstream 70557 29987137 ~ 29987862 (+)
G244107 NA non-coding upstream 73200 29984990 ~ 29985219 (+)
G244083 NA non-coding upstream 91478 29966742 ~ 29966941 (+)
G244220 NA non-coding downstream 812 30059438 ~ 30059653 (+)
G244231 NA non-coding downstream 7617 30066243 ~ 30066454 (+)
G244239 NA non-coding downstream 14249 30072875 ~ 30073119 (+)
G244289 NA non-coding downstream 70971 30129597 ~ 30129834 (+)
G244291 NA non-coding downstream 73173 30131799 ~ 30132007 (+)
G243679 LOC107756720 other upstream 367623 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1023705 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 2308693 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 2334625 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 2499887 27556172 ~ 27558532 (+)
G244292 LOC106583212 other downstream 73773 30132399 ~ 30137564 (+)
G244691 NA other downstream 573144 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 806940 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 859405 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 886112 30939321 ~ 31127608 (+)

Expression


Co-expression Network