G244289


Basic Information

Item Value
gene id G244289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30129597 ~ 30129834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278890
gaccaaaagtatgtggacacctgctcatcaaacatctcattcctaaatcatgggcattcatatggagttgatcccccctttgctgctataacaaccttcactgttctgggaaggcttttcacttttcatgttggaacattgctactgGGACATGTTtccgttcagccacaagagcattagtgaggttgggcactaatgttgggtgattaggcctgactcgcgGTCGGCGTTTCAATtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278890 True 238 lncRNA 0.46 1 30129597 30129834

Neighbor

gene id symbol gene type direction distance location
LOC110517541 LOC106583205 coding upstream 7023 30095176 ~ 30122574 (+)
LOC110517404 LOC106605124 coding upstream 817567 29290920 ~ 29312030 (+)
thrap3a LOC106583094 coding upstream 843120 29256335 ~ 29286477 (+)
map7d1a LOC106583045 coding upstream 945237 29104505 ~ 29184360 (+)
si:ch211-1i11.3 LOC106583027 coding upstream 1046305 29048597 ~ 29083292 (+)
LOC110517569 LOC106583231 coding downstream 12689 30142523 ~ 30165671 (+)
LOC110517587 LOC106583242 coding downstream 40925 30170759 ~ 30196394 (+)
LOC110517613 LOC106583245 coding downstream 66761 30196595 ~ 30217693 (+)
LOC110517635 LOC106583263 coding downstream 88486 30218320 ~ 30220984 (+)
LOC110504010 LOC106583270 coding downstream 131269 30261103 ~ 30281572 (+)
G244239 NA non-coding upstream 56478 30072875 ~ 30073119 (+)
G244231 NA non-coding upstream 63143 30066243 ~ 30066454 (+)
G244220 NA non-coding upstream 69944 30059438 ~ 30059653 (+)
G244218 NA non-coding upstream 70971 30058419 ~ 30058626 (+)
G244216 NA non-coding upstream 71592 30057448 ~ 30058005 (+)
G244291 NA non-coding downstream 1965 30131799 ~ 30132007 (+)
G244293 NA non-coding downstream 7856 30137690 ~ 30138188 (+)
G244294 NA non-coding downstream 8500 30138334 ~ 30138653 (+)
G244443 NA non-coding downstream 152699 30282533 ~ 30282958 (+)
G243679 LOC107756720 other upstream 438801 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1094883 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 2379871 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 2405803 27705985 ~ 27723794 (+)
G241150 LOC106582751 other upstream 2571065 27556172 ~ 27558532 (+)
G244292 LOC106583212 other downstream 2565 30132399 ~ 30137564 (+)
G244691 NA other downstream 501936 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 735732 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 788197 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 814904 30939321 ~ 31127608 (+)

Expression


Co-expression Network