Gene
RNA
| Item | Value |
|---|---|
| gene id | G244291 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30131799 ~ 30132007 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CAP-Gly domain-containing linker protein 4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278892 | True | 209 | lncRNA | 0.61 | 1 | 30131799 | 30132007 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517541 | LOC106583205 | coding | upstream | 9225 | 30095176 ~ 30122574 (+) |
| LOC110517404 | LOC106605124 | coding | upstream | 819769 | 29290920 ~ 29312030 (+) |
| thrap3a | LOC106583094 | coding | upstream | 845322 | 29256335 ~ 29286477 (+) |
| map7d1a | LOC106583045 | coding | upstream | 947439 | 29104505 ~ 29184360 (+) |
| si:ch211-1i11.3 | LOC106583027 | coding | upstream | 1048507 | 29048597 ~ 29083292 (+) |
| LOC110517569 | LOC106583231 | coding | downstream | 10516 | 30142523 ~ 30165671 (+) |
| LOC110517587 | LOC106583242 | coding | downstream | 38752 | 30170759 ~ 30196394 (+) |
| LOC110517613 | LOC106583245 | coding | downstream | 64588 | 30196595 ~ 30217693 (+) |
| LOC110517635 | LOC106583263 | coding | downstream | 86313 | 30218320 ~ 30220984 (+) |
| LOC110504010 | LOC106583270 | coding | downstream | 129096 | 30261103 ~ 30281572 (+) |
| G244289 | NA | non-coding | upstream | 1965 | 30129597 ~ 30129834 (+) |
| G244239 | NA | non-coding | upstream | 58680 | 30072875 ~ 30073119 (+) |
| G244231 | NA | non-coding | upstream | 65345 | 30066243 ~ 30066454 (+) |
| G244220 | NA | non-coding | upstream | 72146 | 30059438 ~ 30059653 (+) |
| G244218 | NA | non-coding | upstream | 73173 | 30058419 ~ 30058626 (+) |
| G244293 | NA | non-coding | downstream | 5683 | 30137690 ~ 30138188 (+) |
| G244294 | NA | non-coding | downstream | 6327 | 30138334 ~ 30138653 (+) |
| G244443 | NA | non-coding | downstream | 150526 | 30282533 ~ 30282958 (+) |
| G244445 | NA | non-coding | downstream | 151822 | 30283829 ~ 30284178 (+) |
| G243679 | LOC107756720 | other | upstream | 441003 | 29668379 ~ 29690796 (+) |
| LOC110517275 | LOC106583018 | other | upstream | 1097085 | 28995823 ~ 29034924 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 2382073 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 2408005 | 27705985 ~ 27723794 (+) |
| G241150 | LOC106582751 | other | upstream | 2573267 | 27556172 ~ 27558532 (+) |
| G244292 | LOC106583212 | other | downstream | 392 | 30132399 ~ 30137564 (+) |
| G244691 | NA | other | downstream | 499763 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 733559 | 30865566 ~ 30874608 (+) |
| LOC110518244 | LOC106583484 | other | downstream | 786024 | 30918022 ~ 30924289 (+) |
| LOC110518266 | LOC106583495 | other | downstream | 812731 | 30939321 ~ 31127608 (+) |
